Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2706 | 8341;8342;8343 | chr2:178771211;178770675;178770674 | chr2:179635938;179635402;179635401 |
N2AB | 2706 | 8341;8342;8343 | chr2:178771211;178770675;178770674 | chr2:179635938;179635402;179635401 |
N2A | 2706 | 8341;8342;8343 | chr2:178771211;178770675;178770674 | chr2:179635938;179635402;179635401 |
N2B | 2660 | 8203;8204;8205 | chr2:178771211;178770675;178770674 | chr2:179635938;179635402;179635401 |
Novex-1 | 2660 | 8203;8204;8205 | chr2:178771211;178770675;178770674 | chr2:179635938;179635402;179635401 |
Novex-2 | 2660 | 8203;8204;8205 | chr2:178771211;178770675;178770674 | chr2:179635938;179635402;179635401 |
Novex-3 | 2706 | 8341;8342;8343 | chr2:178771211;178770675;178770674 | chr2:179635938;179635402;179635401 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 0.993 | D | 0.66 | None | 0.771029458599 | gnomAD-4.0.0 | 1.59984E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85696E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8548 | likely_pathogenic | 0.8798 | pathogenic | -0.832 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
A/D | 0.5244 | ambiguous | 0.5595 | ambiguous | -0.681 | Destabilizing | 0.993 | D | 0.66 | neutral | D | 0.667140411 | None | None | N |
A/E | 0.4922 | ambiguous | 0.4993 | ambiguous | -0.822 | Destabilizing | 0.995 | D | 0.639 | neutral | None | None | None | None | N |
A/F | 0.67 | likely_pathogenic | 0.6739 | pathogenic | -0.847 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | N |
A/G | 0.2251 | likely_benign | 0.2328 | benign | -0.29 | Destabilizing | 0.977 | D | 0.609 | neutral | D | 0.588207977 | None | None | N |
A/H | 0.794 | likely_pathogenic | 0.7903 | pathogenic | -0.26 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
A/I | 0.5936 | likely_pathogenic | 0.5426 | ambiguous | -0.327 | Destabilizing | 0.995 | D | 0.635 | neutral | None | None | None | None | N |
A/K | 0.7546 | likely_pathogenic | 0.7402 | pathogenic | -0.727 | Destabilizing | 0.995 | D | 0.64 | neutral | None | None | None | None | N |
A/L | 0.4211 | ambiguous | 0.3815 | ambiguous | -0.327 | Destabilizing | 0.966 | D | 0.584 | neutral | None | None | None | None | N |
A/M | 0.4498 | ambiguous | 0.3801 | ambiguous | -0.556 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
A/N | 0.4831 | ambiguous | 0.4263 | ambiguous | -0.399 | Destabilizing | 0.995 | D | 0.667 | neutral | None | None | None | None | N |
A/P | 0.3673 | ambiguous | 0.3233 | benign | -0.271 | Destabilizing | 0.997 | D | 0.63 | neutral | D | 0.676454309 | None | None | N |
A/Q | 0.6287 | likely_pathogenic | 0.5786 | pathogenic | -0.666 | Destabilizing | 0.998 | D | 0.652 | neutral | None | None | None | None | N |
A/R | 0.6978 | likely_pathogenic | 0.6994 | pathogenic | -0.248 | Destabilizing | 0.995 | D | 0.645 | neutral | None | None | None | None | N |
A/S | 0.1573 | likely_benign | 0.1415 | benign | -0.565 | Destabilizing | 0.955 | D | 0.575 | neutral | D | 0.629345651 | None | None | N |
A/T | 0.2085 | likely_benign | 0.1529 | benign | -0.632 | Destabilizing | 0.568 | D | 0.485 | neutral | D | 0.629345651 | None | None | N |
A/V | 0.3084 | likely_benign | 0.2647 | benign | -0.271 | Destabilizing | 0.955 | D | 0.609 | neutral | D | 0.667959533 | None | None | N |
A/W | 0.9283 | likely_pathogenic | 0.9325 | pathogenic | -0.984 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
A/Y | 0.7684 | likely_pathogenic | 0.7863 | pathogenic | -0.652 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.