Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27062 | 81409;81410;81411 | chr2:178564948;178564947;178564946 | chr2:179429675;179429674;179429673 |
N2AB | 25421 | 76486;76487;76488 | chr2:178564948;178564947;178564946 | chr2:179429675;179429674;179429673 |
N2A | 24494 | 73705;73706;73707 | chr2:178564948;178564947;178564946 | chr2:179429675;179429674;179429673 |
N2B | 17997 | 54214;54215;54216 | chr2:178564948;178564947;178564946 | chr2:179429675;179429674;179429673 |
Novex-1 | 18122 | 54589;54590;54591 | chr2:178564948;178564947;178564946 | chr2:179429675;179429674;179429673 |
Novex-2 | 18189 | 54790;54791;54792 | chr2:178564948;178564947;178564946 | chr2:179429675;179429674;179429673 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/M | None | None | 0.468 | N | 0.393 | 0.164 | 0.246773566709 | gnomAD-4.0.0 | 6.8486E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99954E-07 | 0 | 0 |
K/R | rs1705141926 | None | 0.094 | N | 0.397 | 0.07 | 0.144782658237 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs1705141926 | None | 0.094 | N | 0.397 | 0.07 | 0.144782658237 | gnomAD-4.0.0 | 6.57212E-06 | None | None | None | None | N | None | 0 | 6.54793E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | None | None | 0.001 | N | 0.24 | 0.147 | 0.181679512989 | gnomAD-4.0.0 | 2.05458E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79991E-06 | 0 | 1.65887E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1546 | likely_benign | 0.1353 | benign | -0.29 | Destabilizing | 0.029 | N | 0.359 | neutral | None | None | None | None | N |
K/C | 0.495 | ambiguous | 0.4508 | ambiguous | -0.508 | Destabilizing | 0.878 | D | 0.584 | neutral | None | None | None | None | N |
K/D | 0.2284 | likely_benign | 0.2033 | benign | 0.041 | Stabilizing | 0.064 | N | 0.403 | neutral | None | None | None | None | N |
K/E | 0.0879 | likely_benign | 0.0828 | benign | 0.121 | Stabilizing | 0.001 | N | 0.267 | neutral | N | 0.362861169 | None | None | N |
K/F | 0.6367 | likely_pathogenic | 0.5699 | pathogenic | -0.237 | Destabilizing | 0.538 | D | 0.631 | neutral | None | None | None | None | N |
K/G | 0.255 | likely_benign | 0.2158 | benign | -0.565 | Destabilizing | 0.064 | N | 0.491 | neutral | None | None | None | None | N |
K/H | 0.2431 | likely_benign | 0.2198 | benign | -0.692 | Destabilizing | 0.538 | D | 0.393 | neutral | None | None | None | None | N |
K/I | 0.2472 | likely_benign | 0.2191 | benign | 0.387 | Stabilizing | 0.001 | N | 0.537 | neutral | None | None | None | None | N |
K/L | 0.2355 | likely_benign | 0.2015 | benign | 0.387 | Stabilizing | 0.023 | N | 0.486 | neutral | None | None | None | None | N |
K/M | 0.1875 | likely_benign | 0.1673 | benign | -0.042 | Destabilizing | 0.468 | N | 0.393 | neutral | N | 0.510800681 | None | None | N |
K/N | 0.206 | likely_benign | 0.1768 | benign | -0.195 | Destabilizing | None | N | 0.219 | neutral | N | 0.450674942 | None | None | N |
K/P | 0.2185 | likely_benign | 0.1794 | benign | 0.19 | Stabilizing | None | N | 0.227 | neutral | None | None | None | None | N |
K/Q | 0.1043 | likely_benign | 0.0972 | benign | -0.215 | Destabilizing | 0.201 | N | 0.415 | neutral | N | 0.4508483 | None | None | N |
K/R | 0.0884 | likely_benign | 0.0859 | benign | -0.203 | Destabilizing | 0.094 | N | 0.397 | neutral | N | 0.510453964 | None | None | N |
K/S | 0.1965 | likely_benign | 0.1671 | benign | -0.719 | Destabilizing | 0.001 | N | 0.184 | neutral | None | None | None | None | N |
K/T | 0.1136 | likely_benign | 0.1015 | benign | -0.453 | Destabilizing | 0.001 | N | 0.24 | neutral | N | 0.457504914 | None | None | N |
K/V | 0.1878 | likely_benign | 0.1663 | benign | 0.19 | Stabilizing | 0.023 | N | 0.489 | neutral | None | None | None | None | N |
K/W | 0.7377 | likely_pathogenic | 0.6939 | pathogenic | -0.233 | Destabilizing | 0.964 | D | 0.653 | prob.neutral | None | None | None | None | N |
K/Y | 0.5051 | ambiguous | 0.4633 | ambiguous | 0.088 | Stabilizing | 0.703 | D | 0.635 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.