Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27066 | 81421;81422;81423 | chr2:178564936;178564935;178564934 | chr2:179429663;179429662;179429661 |
N2AB | 25425 | 76498;76499;76500 | chr2:178564936;178564935;178564934 | chr2:179429663;179429662;179429661 |
N2A | 24498 | 73717;73718;73719 | chr2:178564936;178564935;178564934 | chr2:179429663;179429662;179429661 |
N2B | 18001 | 54226;54227;54228 | chr2:178564936;178564935;178564934 | chr2:179429663;179429662;179429661 |
Novex-1 | 18126 | 54601;54602;54603 | chr2:178564936;178564935;178564934 | chr2:179429663;179429662;179429661 |
Novex-2 | 18193 | 54802;54803;54804 | chr2:178564936;178564935;178564934 | chr2:179429663;179429662;179429661 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1705132608 | None | 0.001 | N | 0.141 | 0.238 | 0.27132560031 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
V/I | None | None | 0.332 | N | 0.45 | 0.167 | 0.509109621728 | gnomAD-4.0.0 | 2.73954E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59969E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2527 | likely_benign | 0.2375 | benign | -2.49 | Highly Destabilizing | 0.001 | N | 0.141 | neutral | N | 0.348377294 | None | None | N |
V/C | 0.8005 | likely_pathogenic | 0.8115 | pathogenic | -2.485 | Highly Destabilizing | 0.977 | D | 0.565 | neutral | None | None | None | None | N |
V/D | 0.9922 | likely_pathogenic | 0.9913 | pathogenic | -3.402 | Highly Destabilizing | 0.919 | D | 0.731 | deleterious | None | None | None | None | N |
V/E | 0.982 | likely_pathogenic | 0.9806 | pathogenic | -3.165 | Highly Destabilizing | 0.808 | D | 0.637 | neutral | N | 0.478356997 | None | None | N |
V/F | 0.8407 | likely_pathogenic | 0.8218 | pathogenic | -1.388 | Destabilizing | 0.919 | D | 0.581 | neutral | None | None | None | None | N |
V/G | 0.7108 | likely_pathogenic | 0.6815 | pathogenic | -2.98 | Highly Destabilizing | 0.376 | N | 0.668 | prob.neutral | N | 0.497066167 | None | None | N |
V/H | 0.9923 | likely_pathogenic | 0.9914 | pathogenic | -2.497 | Highly Destabilizing | 0.992 | D | 0.799 | deleterious | None | None | None | None | N |
V/I | 0.1248 | likely_benign | 0.1185 | benign | -1.094 | Destabilizing | 0.332 | N | 0.45 | neutral | N | 0.448464143 | None | None | N |
V/K | 0.9881 | likely_pathogenic | 0.9872 | pathogenic | -1.945 | Destabilizing | 0.848 | D | 0.627 | neutral | None | None | None | None | N |
V/L | 0.5892 | likely_pathogenic | 0.5511 | ambiguous | -1.094 | Destabilizing | 0.199 | N | 0.442 | neutral | N | 0.485251663 | None | None | N |
V/M | 0.6405 | likely_pathogenic | 0.6046 | pathogenic | -1.627 | Destabilizing | 0.972 | D | 0.443 | neutral | None | None | None | None | N |
V/N | 0.9525 | likely_pathogenic | 0.9482 | pathogenic | -2.446 | Highly Destabilizing | 0.919 | D | 0.785 | deleterious | None | None | None | None | N |
V/P | 0.7783 | likely_pathogenic | 0.7221 | pathogenic | -1.539 | Destabilizing | 0.919 | D | 0.645 | neutral | None | None | None | None | N |
V/Q | 0.9728 | likely_pathogenic | 0.9695 | pathogenic | -2.265 | Highly Destabilizing | 0.919 | D | 0.728 | deleterious | None | None | None | None | N |
V/R | 0.9721 | likely_pathogenic | 0.9703 | pathogenic | -1.794 | Destabilizing | 0.848 | D | 0.782 | deleterious | None | None | None | None | N |
V/S | 0.6268 | likely_pathogenic | 0.6095 | pathogenic | -2.969 | Highly Destabilizing | 0.444 | N | 0.639 | neutral | None | None | None | None | N |
V/T | 0.557 | ambiguous | 0.5157 | ambiguous | -2.599 | Highly Destabilizing | 0.615 | D | 0.431 | neutral | None | None | None | None | N |
V/W | 0.9977 | likely_pathogenic | 0.9972 | pathogenic | -1.79 | Destabilizing | 0.992 | D | 0.832 | deleterious | None | None | None | None | N |
V/Y | 0.9861 | likely_pathogenic | 0.984 | pathogenic | -1.554 | Destabilizing | 0.972 | D | 0.539 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.