Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27068 | 81427;81428;81429 | chr2:178564930;178564929;178564928 | chr2:179429657;179429656;179429655 |
N2AB | 25427 | 76504;76505;76506 | chr2:178564930;178564929;178564928 | chr2:179429657;179429656;179429655 |
N2A | 24500 | 73723;73724;73725 | chr2:178564930;178564929;178564928 | chr2:179429657;179429656;179429655 |
N2B | 18003 | 54232;54233;54234 | chr2:178564930;178564929;178564928 | chr2:179429657;179429656;179429655 |
Novex-1 | 18128 | 54607;54608;54609 | chr2:178564930;178564929;178564928 | chr2:179429657;179429656;179429655 |
Novex-2 | 18195 | 54808;54809;54810 | chr2:178564930;178564929;178564928 | chr2:179429657;179429656;179429655 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 0.015 | N | 0.334 | 0.217 | 0.24896430686 | gnomAD-4.0.0 | 1.59509E-06 | None | None | None | None | N | None | 5.70972E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9163 | likely_pathogenic | 0.9094 | pathogenic | -0.488 | Destabilizing | 0.74 | D | 0.531 | neutral | None | None | None | None | N |
Y/C | 0.6769 | likely_pathogenic | 0.6371 | pathogenic | 0.119 | Stabilizing | 0.994 | D | 0.865 | deleterious | N | 0.483744913 | None | None | N |
Y/D | 0.7681 | likely_pathogenic | 0.798 | pathogenic | 0.867 | Stabilizing | 0.883 | D | 0.842 | deleterious | N | 0.474839881 | None | None | N |
Y/E | 0.9651 | likely_pathogenic | 0.9604 | pathogenic | 0.843 | Stabilizing | 0.909 | D | 0.611 | neutral | None | None | None | None | N |
Y/F | 0.2373 | likely_benign | 0.2115 | benign | -0.235 | Destabilizing | 0.007 | N | 0.274 | neutral | N | 0.465044773 | None | None | N |
Y/G | 0.8844 | likely_pathogenic | 0.8836 | pathogenic | -0.659 | Destabilizing | 0.909 | D | 0.588 | neutral | None | None | None | None | N |
Y/H | 0.4824 | ambiguous | 0.4304 | ambiguous | 0.313 | Stabilizing | 0.015 | N | 0.334 | neutral | N | 0.496831306 | None | None | N |
Y/I | 0.9029 | likely_pathogenic | 0.9023 | pathogenic | -0.072 | Destabilizing | 0.909 | D | 0.549 | neutral | None | None | None | None | N |
Y/K | 0.9453 | likely_pathogenic | 0.9414 | pathogenic | 0.254 | Stabilizing | 0.909 | D | 0.808 | deleterious | None | None | None | None | N |
Y/L | 0.6801 | likely_pathogenic | 0.6694 | pathogenic | -0.072 | Destabilizing | 0.587 | D | 0.527 | neutral | None | None | None | None | N |
Y/M | 0.8826 | likely_pathogenic | 0.8806 | pathogenic | -0.055 | Destabilizing | 0.996 | D | 0.528 | neutral | None | None | None | None | N |
Y/N | 0.5213 | ambiguous | 0.5171 | ambiguous | 0.023 | Stabilizing | 0.883 | D | 0.851 | deleterious | N | 0.493233641 | None | None | N |
Y/P | 0.9096 | likely_pathogenic | 0.8973 | pathogenic | -0.191 | Destabilizing | 0.984 | D | 0.846 | deleterious | None | None | None | None | N |
Y/Q | 0.9424 | likely_pathogenic | 0.9311 | pathogenic | 0.088 | Stabilizing | 0.909 | D | 0.553 | neutral | None | None | None | None | N |
Y/R | 0.9276 | likely_pathogenic | 0.9166 | pathogenic | 0.446 | Stabilizing | 0.909 | D | 0.854 | deleterious | None | None | None | None | N |
Y/S | 0.6826 | likely_pathogenic | 0.6783 | pathogenic | -0.353 | Destabilizing | 0.883 | D | 0.563 | neutral | N | 0.500967689 | None | None | N |
Y/T | 0.9125 | likely_pathogenic | 0.9079 | pathogenic | -0.285 | Destabilizing | 0.953 | D | 0.789 | deleterious | None | None | None | None | N |
Y/V | 0.8612 | likely_pathogenic | 0.8589 | pathogenic | -0.191 | Destabilizing | 0.74 | D | 0.547 | neutral | None | None | None | None | N |
Y/W | 0.7363 | likely_pathogenic | 0.7365 | pathogenic | -0.412 | Destabilizing | 0.996 | D | 0.569 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.