Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27075 | 81448;81449;81450 | chr2:178564909;178564908;178564907 | chr2:179429636;179429635;179429634 |
N2AB | 25434 | 76525;76526;76527 | chr2:178564909;178564908;178564907 | chr2:179429636;179429635;179429634 |
N2A | 24507 | 73744;73745;73746 | chr2:178564909;178564908;178564907 | chr2:179429636;179429635;179429634 |
N2B | 18010 | 54253;54254;54255 | chr2:178564909;178564908;178564907 | chr2:179429636;179429635;179429634 |
Novex-1 | 18135 | 54628;54629;54630 | chr2:178564909;178564908;178564907 | chr2:179429636;179429635;179429634 |
Novex-2 | 18202 | 54829;54830;54831 | chr2:178564909;178564908;178564907 | chr2:179429636;179429635;179429634 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.956 | N | 0.656 | 0.305 | 0.321108458156 | gnomAD-4.0.0 | 1.36959E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.70963E-05 | 0 | 1.65859E-05 |
P/T | None | None | 0.978 | N | 0.697 | 0.323 | 0.377097596864 | gnomAD-4.0.0 | 6.84796E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16393E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0948 | likely_benign | 0.0934 | benign | -1.293 | Destabilizing | 0.198 | N | 0.375 | neutral | N | 0.448077354 | None | None | I |
P/C | 0.5463 | ambiguous | 0.5499 | ambiguous | -0.996 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
P/D | 0.9157 | likely_pathogenic | 0.9254 | pathogenic | -1.135 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | I |
P/E | 0.6315 | likely_pathogenic | 0.6414 | pathogenic | -1.192 | Destabilizing | 0.998 | D | 0.689 | prob.neutral | None | None | None | None | I |
P/F | 0.6886 | likely_pathogenic | 0.6711 | pathogenic | -1.264 | Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | I |
P/G | 0.6257 | likely_pathogenic | 0.641 | pathogenic | -1.534 | Destabilizing | 0.967 | D | 0.723 | prob.delet. | None | None | None | None | I |
P/H | 0.4876 | ambiguous | 0.493 | ambiguous | -1.034 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | I |
P/I | 0.4424 | ambiguous | 0.4095 | ambiguous | -0.756 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | I |
P/K | 0.6725 | likely_pathogenic | 0.6622 | pathogenic | -0.917 | Destabilizing | 0.995 | D | 0.701 | prob.neutral | None | None | None | None | I |
P/L | 0.2475 | likely_benign | 0.234 | benign | -0.756 | Destabilizing | 0.978 | D | 0.789 | deleterious | N | 0.507683108 | None | None | I |
P/M | 0.421 | ambiguous | 0.3966 | ambiguous | -0.561 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
P/N | 0.7009 | likely_pathogenic | 0.7153 | pathogenic | -0.667 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | I |
P/Q | 0.3179 | likely_benign | 0.3113 | benign | -0.951 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | N | 0.480727308 | None | None | I |
P/R | 0.5249 | ambiguous | 0.5179 | ambiguous | -0.368 | Destabilizing | 0.997 | D | 0.767 | deleterious | N | 0.495059355 | None | None | I |
P/S | 0.2259 | likely_benign | 0.2364 | benign | -1.159 | Destabilizing | 0.956 | D | 0.656 | neutral | N | 0.472244612 | None | None | I |
P/T | 0.2495 | likely_benign | 0.2487 | benign | -1.115 | Destabilizing | 0.978 | D | 0.697 | prob.neutral | N | 0.485780191 | None | None | I |
P/V | 0.32 | likely_benign | 0.2989 | benign | -0.9 | Destabilizing | 0.983 | D | 0.747 | deleterious | None | None | None | None | I |
P/W | 0.8891 | likely_pathogenic | 0.8942 | pathogenic | -1.338 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
P/Y | 0.7242 | likely_pathogenic | 0.7266 | pathogenic | -1.044 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.