Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27086 | 81481;81482;81483 | chr2:178564876;178564875;178564874 | chr2:179429603;179429602;179429601 |
N2AB | 25445 | 76558;76559;76560 | chr2:178564876;178564875;178564874 | chr2:179429603;179429602;179429601 |
N2A | 24518 | 73777;73778;73779 | chr2:178564876;178564875;178564874 | chr2:179429603;179429602;179429601 |
N2B | 18021 | 54286;54287;54288 | chr2:178564876;178564875;178564874 | chr2:179429603;179429602;179429601 |
Novex-1 | 18146 | 54661;54662;54663 | chr2:178564876;178564875;178564874 | chr2:179429603;179429602;179429601 |
Novex-2 | 18213 | 54862;54863;54864 | chr2:178564876;178564875;178564874 | chr2:179429603;179429602;179429601 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.001 | N | 0.253 | 0.149 | 0.231873229951 | gnomAD-4.0.0 | 1.59458E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43964E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6166 | likely_pathogenic | 0.5714 | pathogenic | -0.339 | Destabilizing | 0.272 | N | 0.506 | neutral | None | None | None | None | N |
K/C | 0.8038 | likely_pathogenic | 0.7642 | pathogenic | -0.601 | Destabilizing | 0.968 | D | 0.755 | deleterious | None | None | None | None | N |
K/D | 0.908 | likely_pathogenic | 0.8898 | pathogenic | -0.852 | Destabilizing | 0.157 | N | 0.501 | neutral | None | None | None | None | N |
K/E | 0.5018 | ambiguous | 0.465 | ambiguous | -0.801 | Destabilizing | 0.001 | N | 0.253 | neutral | N | 0.464528249 | None | None | N |
K/F | 0.9577 | likely_pathogenic | 0.95 | pathogenic | -0.461 | Destabilizing | 0.726 | D | 0.712 | prob.delet. | None | None | None | None | N |
K/G | 0.6436 | likely_pathogenic | 0.6039 | pathogenic | -0.637 | Destabilizing | 0.272 | N | 0.562 | neutral | None | None | None | None | N |
K/H | 0.5203 | ambiguous | 0.5021 | ambiguous | -1.146 | Destabilizing | 0.909 | D | 0.551 | neutral | None | None | None | None | N |
K/I | 0.8228 | likely_pathogenic | 0.7987 | pathogenic | 0.403 | Stabilizing | 0.667 | D | 0.718 | prob.delet. | N | 0.500766893 | None | None | N |
K/L | 0.7783 | likely_pathogenic | 0.7346 | pathogenic | 0.403 | Stabilizing | 0.567 | D | 0.563 | neutral | None | None | None | None | N |
K/M | 0.6279 | likely_pathogenic | 0.5694 | pathogenic | 0.491 | Stabilizing | 0.968 | D | 0.543 | neutral | None | None | None | None | N |
K/N | 0.8059 | likely_pathogenic | 0.781 | pathogenic | -0.553 | Destabilizing | 0.497 | N | 0.457 | neutral | N | 0.472240931 | None | None | N |
K/P | 0.9021 | likely_pathogenic | 0.893 | pathogenic | 0.186 | Stabilizing | 0.726 | D | 0.547 | neutral | None | None | None | None | N |
K/Q | 0.2882 | likely_benign | 0.2606 | benign | -0.813 | Destabilizing | 0.331 | N | 0.498 | neutral | N | 0.481813264 | None | None | N |
K/R | 0.0786 | likely_benign | 0.0695 | benign | -0.496 | Destabilizing | 0.001 | N | 0.155 | neutral | N | 0.486195812 | None | None | N |
K/S | 0.719 | likely_pathogenic | 0.6771 | pathogenic | -1.027 | Destabilizing | 0.272 | N | 0.451 | neutral | None | None | None | None | N |
K/T | 0.6079 | likely_pathogenic | 0.5633 | ambiguous | -0.806 | Destabilizing | 0.497 | N | 0.511 | neutral | N | 0.473037398 | None | None | N |
K/V | 0.7688 | likely_pathogenic | 0.719 | pathogenic | 0.186 | Stabilizing | 0.567 | D | 0.602 | neutral | None | None | None | None | N |
K/W | 0.9205 | likely_pathogenic | 0.9055 | pathogenic | -0.416 | Destabilizing | 0.968 | D | 0.744 | deleterious | None | None | None | None | N |
K/Y | 0.884 | likely_pathogenic | 0.8683 | pathogenic | -0.017 | Destabilizing | 0.726 | D | 0.682 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.