Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27087 | 81484;81485;81486 | chr2:178564873;178564872;178564871 | chr2:179429600;179429599;179429598 |
N2AB | 25446 | 76561;76562;76563 | chr2:178564873;178564872;178564871 | chr2:179429600;179429599;179429598 |
N2A | 24519 | 73780;73781;73782 | chr2:178564873;178564872;178564871 | chr2:179429600;179429599;179429598 |
N2B | 18022 | 54289;54290;54291 | chr2:178564873;178564872;178564871 | chr2:179429600;179429599;179429598 |
Novex-1 | 18147 | 54664;54665;54666 | chr2:178564873;178564872;178564871 | chr2:179429600;179429599;179429598 |
Novex-2 | 18214 | 54865;54866;54867 | chr2:178564873;178564872;178564871 | chr2:179429600;179429599;179429598 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.939 | N | 0.527 | 0.282 | 0.18995819373 | gnomAD-4.0.0 | 1.59443E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03251E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2822 | likely_benign | 0.2758 | benign | -0.213 | Destabilizing | 0.885 | D | 0.489 | neutral | N | 0.491741219 | None | None | N |
D/C | 0.6587 | likely_pathogenic | 0.6331 | pathogenic | 0.185 | Stabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
D/E | 0.1315 | likely_benign | 0.1371 | benign | -0.666 | Destabilizing | 0.17 | N | 0.238 | neutral | N | 0.487601321 | None | None | N |
D/F | 0.6018 | likely_pathogenic | 0.6018 | pathogenic | -0.839 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
D/G | 0.1997 | likely_benign | 0.2003 | benign | -0.399 | Destabilizing | 0.885 | D | 0.514 | neutral | N | 0.475763331 | None | None | N |
D/H | 0.371 | ambiguous | 0.3529 | ambiguous | -1.076 | Destabilizing | 0.999 | D | 0.592 | neutral | N | 0.472978627 | None | None | N |
D/I | 0.4803 | ambiguous | 0.4822 | ambiguous | 0.225 | Stabilizing | 0.993 | D | 0.717 | prob.delet. | None | None | None | None | N |
D/K | 0.5042 | ambiguous | 0.4898 | ambiguous | 0.255 | Stabilizing | 0.953 | D | 0.545 | neutral | None | None | None | None | N |
D/L | 0.4787 | ambiguous | 0.4696 | ambiguous | 0.225 | Stabilizing | 0.986 | D | 0.704 | prob.neutral | None | None | None | None | N |
D/M | 0.6278 | likely_pathogenic | 0.6143 | pathogenic | 0.639 | Stabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
D/N | 0.1019 | likely_benign | 0.1031 | benign | 0.111 | Stabilizing | 0.939 | D | 0.527 | neutral | N | 0.501413194 | None | None | N |
D/P | 0.9371 | likely_pathogenic | 0.9486 | pathogenic | 0.101 | Stabilizing | 0.993 | D | 0.622 | neutral | None | None | None | None | N |
D/Q | 0.3796 | ambiguous | 0.3545 | ambiguous | 0.082 | Stabilizing | 0.986 | D | 0.589 | neutral | None | None | None | None | N |
D/R | 0.5772 | likely_pathogenic | 0.5504 | ambiguous | 0.033 | Stabilizing | 0.986 | D | 0.673 | neutral | None | None | None | None | N |
D/S | 0.1525 | likely_benign | 0.1501 | benign | -0.033 | Destabilizing | 0.386 | N | 0.272 | neutral | None | None | None | None | N |
D/T | 0.2342 | likely_benign | 0.2287 | benign | 0.117 | Stabilizing | 0.91 | D | 0.54 | neutral | None | None | None | None | N |
D/V | 0.3095 | likely_benign | 0.307 | benign | 0.101 | Stabilizing | 0.982 | D | 0.705 | prob.neutral | D | 0.524088615 | None | None | N |
D/W | 0.8888 | likely_pathogenic | 0.8862 | pathogenic | -0.948 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
D/Y | 0.2531 | likely_benign | 0.2491 | benign | -0.636 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | N | 0.489437041 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.