Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27090 | 81493;81494;81495 | chr2:178564864;178564863;178564862 | chr2:179429591;179429590;179429589 |
N2AB | 25449 | 76570;76571;76572 | chr2:178564864;178564863;178564862 | chr2:179429591;179429590;179429589 |
N2A | 24522 | 73789;73790;73791 | chr2:178564864;178564863;178564862 | chr2:179429591;179429590;179429589 |
N2B | 18025 | 54298;54299;54300 | chr2:178564864;178564863;178564862 | chr2:179429591;179429590;179429589 |
Novex-1 | 18150 | 54673;54674;54675 | chr2:178564864;178564863;178564862 | chr2:179429591;179429590;179429589 |
Novex-2 | 18217 | 54874;54875;54876 | chr2:178564864;178564863;178564862 | chr2:179429591;179429590;179429589 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1230737429 | -1.538 | 0.56 | N | 0.605 | 0.293 | 0.72796072516 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
L/P | rs1230737429 | -1.538 | 0.56 | N | 0.605 | 0.293 | 0.72796072516 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/P | rs1230737429 | -1.538 | 0.56 | N | 0.605 | 0.293 | 0.72796072516 | gnomAD-4.0.0 | 6.57281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47024E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1388 | likely_benign | 0.128 | benign | -2.057 | Highly Destabilizing | 0.016 | N | 0.364 | neutral | None | None | None | None | N |
L/C | 0.3453 | ambiguous | 0.313 | benign | -1.42 | Destabilizing | 0.628 | D | 0.517 | neutral | None | None | None | None | N |
L/D | 0.4172 | ambiguous | 0.3945 | ambiguous | -1.934 | Destabilizing | 0.356 | N | 0.604 | neutral | None | None | None | None | N |
L/E | 0.2322 | likely_benign | 0.2256 | benign | -1.885 | Destabilizing | 0.136 | N | 0.571 | neutral | None | None | None | None | N |
L/F | 0.1062 | likely_benign | 0.0973 | benign | -1.395 | Destabilizing | 0.055 | N | 0.456 | neutral | N | 0.497932958 | None | None | N |
L/G | 0.443 | ambiguous | 0.3933 | ambiguous | -2.415 | Highly Destabilizing | 0.136 | N | 0.545 | neutral | None | None | None | None | N |
L/H | 0.1614 | likely_benign | 0.1413 | benign | -1.585 | Destabilizing | 0.828 | D | 0.588 | neutral | N | 0.474517381 | None | None | N |
L/I | 0.0569 | likely_benign | 0.058 | benign | -1.108 | Destabilizing | None | N | 0.237 | neutral | N | 0.412660845 | None | None | N |
L/K | 0.3114 | likely_benign | 0.2761 | benign | -1.442 | Destabilizing | 0.072 | N | 0.52 | neutral | None | None | None | None | N |
L/M | 0.0803 | likely_benign | 0.0713 | benign | -0.984 | Destabilizing | 0.002 | N | 0.306 | neutral | None | None | None | None | N |
L/N | 0.1958 | likely_benign | 0.179 | benign | -1.391 | Destabilizing | 0.356 | N | 0.603 | neutral | None | None | None | None | N |
L/P | 0.8542 | likely_pathogenic | 0.8562 | pathogenic | -1.397 | Destabilizing | 0.56 | D | 0.605 | neutral | N | 0.498106317 | None | None | N |
L/Q | 0.1424 | likely_benign | 0.1217 | benign | -1.561 | Destabilizing | 0.356 | N | 0.572 | neutral | None | None | None | None | N |
L/R | 0.246 | likely_benign | 0.2169 | benign | -0.845 | Destabilizing | 0.171 | N | 0.585 | neutral | N | 0.450024368 | None | None | N |
L/S | 0.1436 | likely_benign | 0.1249 | benign | -2.017 | Highly Destabilizing | 0.038 | N | 0.474 | neutral | None | None | None | None | N |
L/T | 0.0813 | likely_benign | 0.0773 | benign | -1.858 | Destabilizing | None | N | 0.317 | neutral | None | None | None | None | N |
L/V | 0.0606 | likely_benign | 0.06 | benign | -1.397 | Destabilizing | None | N | 0.262 | neutral | N | 0.358479644 | None | None | N |
L/W | 0.2188 | likely_benign | 0.1931 | benign | -1.511 | Destabilizing | 0.864 | D | 0.595 | neutral | None | None | None | None | N |
L/Y | 0.2471 | likely_benign | 0.2266 | benign | -1.286 | Destabilizing | 0.356 | N | 0.549 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.