Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2709081493;81494;81495 chr2:178564864;178564863;178564862chr2:179429591;179429590;179429589
N2AB2544976570;76571;76572 chr2:178564864;178564863;178564862chr2:179429591;179429590;179429589
N2A2452273789;73790;73791 chr2:178564864;178564863;178564862chr2:179429591;179429590;179429589
N2B1802554298;54299;54300 chr2:178564864;178564863;178564862chr2:179429591;179429590;179429589
Novex-11815054673;54674;54675 chr2:178564864;178564863;178564862chr2:179429591;179429590;179429589
Novex-21821754874;54875;54876 chr2:178564864;178564863;178564862chr2:179429591;179429590;179429589
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-85
  • Domain position: 19
  • Structural Position: 21
  • Q(SASA): 0.2318
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P rs1230737429 -1.538 0.56 N 0.605 0.293 0.72796072516 gnomAD-2.1.1 3.18E-05 None None None None N None 0 0 None 0 0 None 0 None 0 6.48E-05 0
L/P rs1230737429 -1.538 0.56 N 0.605 0.293 0.72796072516 gnomAD-3.1.2 6.57E-06 None None None None N None 0 0 0 0 0 None 0 0 1.47E-05 0 0
L/P rs1230737429 -1.538 0.56 N 0.605 0.293 0.72796072516 gnomAD-4.0.0 6.57281E-06 None None None None N None 0 0 None 0 0 None 0 0 1.47024E-05 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1388 likely_benign 0.128 benign -2.057 Highly Destabilizing 0.016 N 0.364 neutral None None None None N
L/C 0.3453 ambiguous 0.313 benign -1.42 Destabilizing 0.628 D 0.517 neutral None None None None N
L/D 0.4172 ambiguous 0.3945 ambiguous -1.934 Destabilizing 0.356 N 0.604 neutral None None None None N
L/E 0.2322 likely_benign 0.2256 benign -1.885 Destabilizing 0.136 N 0.571 neutral None None None None N
L/F 0.1062 likely_benign 0.0973 benign -1.395 Destabilizing 0.055 N 0.456 neutral N 0.497932958 None None N
L/G 0.443 ambiguous 0.3933 ambiguous -2.415 Highly Destabilizing 0.136 N 0.545 neutral None None None None N
L/H 0.1614 likely_benign 0.1413 benign -1.585 Destabilizing 0.828 D 0.588 neutral N 0.474517381 None None N
L/I 0.0569 likely_benign 0.058 benign -1.108 Destabilizing None N 0.237 neutral N 0.412660845 None None N
L/K 0.3114 likely_benign 0.2761 benign -1.442 Destabilizing 0.072 N 0.52 neutral None None None None N
L/M 0.0803 likely_benign 0.0713 benign -0.984 Destabilizing 0.002 N 0.306 neutral None None None None N
L/N 0.1958 likely_benign 0.179 benign -1.391 Destabilizing 0.356 N 0.603 neutral None None None None N
L/P 0.8542 likely_pathogenic 0.8562 pathogenic -1.397 Destabilizing 0.56 D 0.605 neutral N 0.498106317 None None N
L/Q 0.1424 likely_benign 0.1217 benign -1.561 Destabilizing 0.356 N 0.572 neutral None None None None N
L/R 0.246 likely_benign 0.2169 benign -0.845 Destabilizing 0.171 N 0.585 neutral N 0.450024368 None None N
L/S 0.1436 likely_benign 0.1249 benign -2.017 Highly Destabilizing 0.038 N 0.474 neutral None None None None N
L/T 0.0813 likely_benign 0.0773 benign -1.858 Destabilizing None N 0.317 neutral None None None None N
L/V 0.0606 likely_benign 0.06 benign -1.397 Destabilizing None N 0.262 neutral N 0.358479644 None None N
L/W 0.2188 likely_benign 0.1931 benign -1.511 Destabilizing 0.864 D 0.595 neutral None None None None N
L/Y 0.2471 likely_benign 0.2266 benign -1.286 Destabilizing 0.356 N 0.549 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.