Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27091 | 81496;81497;81498 | chr2:178564861;178564860;178564859 | chr2:179429588;179429587;179429586 |
N2AB | 25450 | 76573;76574;76575 | chr2:178564861;178564860;178564859 | chr2:179429588;179429587;179429586 |
N2A | 24523 | 73792;73793;73794 | chr2:178564861;178564860;178564859 | chr2:179429588;179429587;179429586 |
N2B | 18026 | 54301;54302;54303 | chr2:178564861;178564860;178564859 | chr2:179429588;179429587;179429586 |
Novex-1 | 18151 | 54676;54677;54678 | chr2:178564861;178564860;178564859 | chr2:179429588;179429587;179429586 |
Novex-2 | 18218 | 54877;54878;54879 | chr2:178564861;178564860;178564859 | chr2:179429588;179429587;179429586 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 0.967 | D | 0.815 | 0.539 | 0.779090105017 | gnomAD-4.0.0 | 1.59314E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86002E-06 | 0 | 0 |
V/G | None | None | 0.967 | D | 0.821 | 0.481 | 0.843077508603 | gnomAD-4.0.0 | 1.59314E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43612E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8813 | likely_pathogenic | 0.8494 | pathogenic | -2.245 | Highly Destabilizing | 0.892 | D | 0.659 | neutral | N | 0.509658117 | None | None | N |
V/C | 0.9363 | likely_pathogenic | 0.9291 | pathogenic | -1.098 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/D | 0.9986 | likely_pathogenic | 0.9983 | pathogenic | -2.899 | Highly Destabilizing | 0.987 | D | 0.871 | deleterious | None | None | None | None | N |
V/E | 0.9937 | likely_pathogenic | 0.9927 | pathogenic | -2.602 | Highly Destabilizing | 0.967 | D | 0.815 | deleterious | D | 0.522028381 | None | None | N |
V/F | 0.8275 | likely_pathogenic | 0.7872 | pathogenic | -1.293 | Destabilizing | 0.987 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/G | 0.9454 | likely_pathogenic | 0.9339 | pathogenic | -2.771 | Highly Destabilizing | 0.967 | D | 0.821 | deleterious | D | 0.522028381 | None | None | N |
V/H | 0.9971 | likely_pathogenic | 0.9968 | pathogenic | -2.657 | Highly Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
V/I | 0.0786 | likely_benign | 0.0771 | benign | -0.683 | Destabilizing | 0.128 | N | 0.299 | neutral | None | None | None | None | N |
V/K | 0.9944 | likely_pathogenic | 0.994 | pathogenic | -1.658 | Destabilizing | 0.975 | D | 0.815 | deleterious | None | None | None | None | N |
V/L | 0.3448 | ambiguous | 0.3005 | benign | -0.683 | Destabilizing | 0.63 | D | 0.661 | neutral | N | 0.42863787 | None | None | N |
V/M | 0.6603 | likely_pathogenic | 0.5963 | pathogenic | -0.863 | Destabilizing | 0.983 | D | 0.643 | neutral | N | 0.488920516 | None | None | N |
V/N | 0.9944 | likely_pathogenic | 0.9932 | pathogenic | -2.399 | Highly Destabilizing | 0.987 | D | 0.873 | deleterious | None | None | None | None | N |
V/P | 0.9894 | likely_pathogenic | 0.9882 | pathogenic | -1.193 | Destabilizing | 0.073 | N | 0.723 | prob.delet. | None | None | None | None | N |
V/Q | 0.9907 | likely_pathogenic | 0.9892 | pathogenic | -1.992 | Destabilizing | 0.987 | D | 0.855 | deleterious | None | None | None | None | N |
V/R | 0.9896 | likely_pathogenic | 0.989 | pathogenic | -1.931 | Destabilizing | 0.987 | D | 0.881 | deleterious | None | None | None | None | N |
V/S | 0.9768 | likely_pathogenic | 0.97 | pathogenic | -2.69 | Highly Destabilizing | 0.975 | D | 0.785 | deleterious | None | None | None | None | N |
V/T | 0.9317 | likely_pathogenic | 0.9148 | pathogenic | -2.252 | Highly Destabilizing | 0.916 | D | 0.638 | neutral | None | None | None | None | N |
V/W | 0.9973 | likely_pathogenic | 0.9963 | pathogenic | -1.639 | Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | N |
V/Y | 0.9869 | likely_pathogenic | 0.9838 | pathogenic | -1.493 | Destabilizing | 0.996 | D | 0.706 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.