Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27092 | 81499;81500;81501 | chr2:178564858;178564857;178564856 | chr2:179429585;179429584;179429583 |
N2AB | 25451 | 76576;76577;76578 | chr2:178564858;178564857;178564856 | chr2:179429585;179429584;179429583 |
N2A | 24524 | 73795;73796;73797 | chr2:178564858;178564857;178564856 | chr2:179429585;179429584;179429583 |
N2B | 18027 | 54304;54305;54306 | chr2:178564858;178564857;178564856 | chr2:179429585;179429584;179429583 |
Novex-1 | 18152 | 54679;54680;54681 | chr2:178564858;178564857;178564856 | chr2:179429585;179429584;179429583 |
Novex-2 | 18219 | 54880;54881;54882 | chr2:178564858;178564857;178564856 | chr2:179429585;179429584;179429583 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | rs950280958 | 0.637 | 0.062 | N | 0.502 | 0.167 | 0.405979908929 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.29E-05 | None | 0 | 0 | 0 |
Q/L | rs950280958 | 0.637 | 0.062 | N | 0.502 | 0.167 | 0.405979908929 | gnomAD-4.0.0 | 1.59306E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.436E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.195 | likely_benign | 0.2014 | benign | -1.057 | Destabilizing | 0.035 | N | 0.471 | neutral | None | None | None | None | N |
Q/C | 0.3782 | ambiguous | 0.4336 | ambiguous | -0.403 | Destabilizing | 0.935 | D | 0.597 | neutral | None | None | None | None | N |
Q/D | 0.448 | ambiguous | 0.4833 | ambiguous | -1.872 | Destabilizing | 0.035 | N | 0.423 | neutral | None | None | None | None | N |
Q/E | 0.0827 | likely_benign | 0.076 | benign | -1.582 | Destabilizing | None | N | 0.192 | neutral | N | 0.386839681 | None | None | N |
Q/F | 0.5746 | likely_pathogenic | 0.655 | pathogenic | -0.433 | Destabilizing | 0.555 | D | 0.585 | neutral | None | None | None | None | N |
Q/G | 0.2841 | likely_benign | 0.2955 | benign | -1.501 | Destabilizing | 0.149 | N | 0.515 | neutral | None | None | None | None | N |
Q/H | 0.1566 | likely_benign | 0.2034 | benign | -1.046 | Destabilizing | 0.484 | N | 0.519 | neutral | N | 0.474768097 | None | None | N |
Q/I | 0.3067 | likely_benign | 0.3404 | ambiguous | 0.171 | Stabilizing | 0.38 | N | 0.599 | neutral | None | None | None | None | N |
Q/K | 0.1246 | likely_benign | 0.1207 | benign | -0.575 | Destabilizing | 0.027 | N | 0.455 | neutral | N | 0.455854262 | None | None | N |
Q/L | 0.1313 | likely_benign | 0.1479 | benign | 0.171 | Stabilizing | 0.062 | N | 0.502 | neutral | N | 0.472978586 | None | None | N |
Q/M | 0.2813 | likely_benign | 0.3008 | benign | 0.29 | Stabilizing | 0.791 | D | 0.523 | neutral | None | None | None | None | N |
Q/N | 0.2636 | likely_benign | 0.3157 | benign | -1.378 | Destabilizing | 0.149 | N | 0.397 | neutral | None | None | None | None | N |
Q/P | 0.8513 | likely_pathogenic | 0.8768 | pathogenic | -0.215 | Destabilizing | 0.211 | N | 0.522 | neutral | N | 0.483182844 | None | None | N |
Q/R | 0.124 | likely_benign | 0.1239 | benign | -0.781 | Destabilizing | 0.062 | N | 0.407 | neutral | N | 0.457046341 | None | None | N |
Q/S | 0.1937 | likely_benign | 0.205 | benign | -1.631 | Destabilizing | 0.035 | N | 0.422 | neutral | None | None | None | None | N |
Q/T | 0.1522 | likely_benign | 0.1508 | benign | -1.168 | Destabilizing | 0.002 | N | 0.333 | neutral | None | None | None | None | N |
Q/V | 0.1867 | likely_benign | 0.2058 | benign | -0.215 | Destabilizing | 0.081 | N | 0.511 | neutral | None | None | None | None | N |
Q/W | 0.5413 | ambiguous | 0.5839 | pathogenic | -0.58 | Destabilizing | 0.935 | D | 0.609 | neutral | None | None | None | None | N |
Q/Y | 0.3536 | ambiguous | 0.4279 | ambiguous | -0.17 | Destabilizing | 0.791 | D | 0.573 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.