Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27095 | 81508;81509;81510 | chr2:178564849;178564848;178564847 | chr2:179429576;179429575;179429574 |
N2AB | 25454 | 76585;76586;76587 | chr2:178564849;178564848;178564847 | chr2:179429576;179429575;179429574 |
N2A | 24527 | 73804;73805;73806 | chr2:178564849;178564848;178564847 | chr2:179429576;179429575;179429574 |
N2B | 18030 | 54313;54314;54315 | chr2:178564849;178564848;178564847 | chr2:179429576;179429575;179429574 |
Novex-1 | 18155 | 54688;54689;54690 | chr2:178564849;178564848;178564847 | chr2:179429576;179429575;179429574 |
Novex-2 | 18222 | 54889;54890;54891 | chr2:178564849;178564848;178564847 | chr2:179429576;179429575;179429574 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1415718775 | None | 0.285 | N | 0.379 | 0.251 | 0.252681307341 | gnomAD-4.0.0 | 1.36893E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9959E-07 | 1.16044E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1543 | likely_benign | 0.137 | benign | -0.164 | Destabilizing | 0.005 | N | 0.205 | neutral | N | 0.415794364 | None | None | N |
E/C | 0.8115 | likely_pathogenic | 0.7935 | pathogenic | -0.319 | Destabilizing | 0.991 | D | 0.462 | neutral | None | None | None | None | N |
E/D | 0.3086 | likely_benign | 0.2766 | benign | -1.016 | Destabilizing | 0.285 | N | 0.383 | neutral | N | 0.500261187 | None | None | N |
E/F | 0.8262 | likely_pathogenic | 0.7957 | pathogenic | 0.564 | Stabilizing | 0.818 | D | 0.514 | neutral | None | None | None | None | N |
E/G | 0.3207 | likely_benign | 0.2847 | benign | -0.518 | Destabilizing | 0.001 | N | 0.301 | neutral | N | 0.491390988 | None | None | N |
E/H | 0.5992 | likely_pathogenic | 0.5737 | pathogenic | 0.618 | Stabilizing | 0.965 | D | 0.513 | neutral | None | None | None | None | N |
E/I | 0.2781 | likely_benign | 0.2495 | benign | 0.791 | Stabilizing | 0.39 | N | 0.507 | neutral | None | None | None | None | N |
E/K | 0.12 | likely_benign | 0.117 | benign | -0.061 | Destabilizing | 0.285 | N | 0.379 | neutral | N | 0.427667583 | None | None | N |
E/L | 0.3666 | ambiguous | 0.3304 | benign | 0.791 | Stabilizing | 0.209 | N | 0.353 | neutral | None | None | None | None | N |
E/M | 0.4152 | ambiguous | 0.3752 | ambiguous | 0.781 | Stabilizing | 0.103 | N | 0.323 | neutral | None | None | None | None | N |
E/N | 0.4726 | ambiguous | 0.439 | ambiguous | -0.75 | Destabilizing | 0.561 | D | 0.457 | neutral | None | None | None | None | N |
E/P | 0.3485 | ambiguous | 0.3293 | benign | 0.495 | Stabilizing | 0.002 | N | 0.191 | neutral | None | None | None | None | N |
E/Q | 0.1372 | likely_benign | 0.1313 | benign | -0.557 | Destabilizing | 0.662 | D | 0.457 | neutral | N | 0.482502146 | None | None | N |
E/R | 0.2385 | likely_benign | 0.2331 | benign | 0.311 | Stabilizing | 0.722 | D | 0.462 | neutral | None | None | None | None | N |
E/S | 0.298 | likely_benign | 0.2694 | benign | -0.954 | Destabilizing | 0.209 | N | 0.376 | neutral | None | None | None | None | N |
E/T | 0.2668 | likely_benign | 0.2427 | benign | -0.636 | Destabilizing | 0.345 | N | 0.415 | neutral | None | None | None | None | N |
E/V | 0.1634 | likely_benign | 0.1542 | benign | 0.495 | Stabilizing | 0.003 | N | 0.329 | neutral | N | 0.478827122 | None | None | N |
E/W | 0.9552 | likely_pathogenic | 0.9478 | pathogenic | 0.775 | Stabilizing | 0.991 | D | 0.501 | neutral | None | None | None | None | N |
E/Y | 0.7207 | likely_pathogenic | 0.7006 | pathogenic | 0.836 | Stabilizing | 0.965 | D | 0.52 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.