Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27099 | 81520;81521;81522 | chr2:178564837;178564836;178564835 | chr2:179429564;179429563;179429562 |
N2AB | 25458 | 76597;76598;76599 | chr2:178564837;178564836;178564835 | chr2:179429564;179429563;179429562 |
N2A | 24531 | 73816;73817;73818 | chr2:178564837;178564836;178564835 | chr2:179429564;179429563;179429562 |
N2B | 18034 | 54325;54326;54327 | chr2:178564837;178564836;178564835 | chr2:179429564;179429563;179429562 |
Novex-1 | 18159 | 54700;54701;54702 | chr2:178564837;178564836;178564835 | chr2:179429564;179429563;179429562 |
Novex-2 | 18226 | 54901;54902;54903 | chr2:178564837;178564836;178564835 | chr2:179429564;179429563;179429562 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.978 | N | 0.57 | 0.504 | 0.397540356873 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
D/Y | rs1320967672 | None | 0.999 | D | 0.743 | 0.403 | 0.696367886986 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6511 | likely_pathogenic | 0.6587 | pathogenic | -0.216 | Destabilizing | 0.989 | D | 0.635 | neutral | N | 0.496020406 | None | None | I |
D/C | 0.9052 | likely_pathogenic | 0.9061 | pathogenic | 0.137 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
D/E | 0.7692 | likely_pathogenic | 0.756 | pathogenic | -0.746 | Destabilizing | 0.948 | D | 0.472 | neutral | N | 0.498298131 | None | None | I |
D/F | 0.9474 | likely_pathogenic | 0.9465 | pathogenic | -0.521 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | I |
D/G | 0.5676 | likely_pathogenic | 0.5799 | pathogenic | -0.474 | Destabilizing | 0.978 | D | 0.57 | neutral | N | 0.514164341 | None | None | I |
D/H | 0.7387 | likely_pathogenic | 0.7603 | pathogenic | -0.905 | Destabilizing | 0.997 | D | 0.709 | prob.delet. | N | 0.502047567 | None | None | I |
D/I | 0.879 | likely_pathogenic | 0.8867 | pathogenic | 0.426 | Stabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | I |
D/K | 0.8793 | likely_pathogenic | 0.8925 | pathogenic | 0.043 | Stabilizing | 0.983 | D | 0.603 | neutral | None | None | None | None | I |
D/L | 0.8804 | likely_pathogenic | 0.8804 | pathogenic | 0.426 | Stabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | I |
D/M | 0.9434 | likely_pathogenic | 0.9482 | pathogenic | 0.866 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
D/N | 0.123 | likely_benign | 0.1241 | benign | -0.21 | Destabilizing | 0.198 | N | 0.187 | neutral | N | 0.48236886 | None | None | I |
D/P | 0.9361 | likely_pathogenic | 0.9441 | pathogenic | 0.237 | Stabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | I |
D/Q | 0.8736 | likely_pathogenic | 0.88 | pathogenic | -0.153 | Destabilizing | 0.998 | D | 0.68 | prob.neutral | None | None | None | None | I |
D/R | 0.8759 | likely_pathogenic | 0.9003 | pathogenic | -0.076 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | I |
D/S | 0.2811 | likely_benign | 0.2822 | benign | -0.358 | Destabilizing | 0.983 | D | 0.576 | neutral | None | None | None | None | I |
D/T | 0.4241 | ambiguous | 0.4406 | ambiguous | -0.152 | Destabilizing | 0.983 | D | 0.598 | neutral | None | None | None | None | I |
D/V | 0.752 | likely_pathogenic | 0.7615 | pathogenic | 0.237 | Stabilizing | 0.999 | D | 0.755 | deleterious | N | 0.517669833 | None | None | I |
D/W | 0.9883 | likely_pathogenic | 0.9898 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
D/Y | 0.6566 | likely_pathogenic | 0.6872 | pathogenic | -0.319 | Destabilizing | 0.999 | D | 0.743 | deleterious | D | 0.537041536 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.