Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27102 | 81529;81530;81531 | chr2:178564828;178564827;178564826 | chr2:179429555;179429554;179429553 |
N2AB | 25461 | 76606;76607;76608 | chr2:178564828;178564827;178564826 | chr2:179429555;179429554;179429553 |
N2A | 24534 | 73825;73826;73827 | chr2:178564828;178564827;178564826 | chr2:179429555;179429554;179429553 |
N2B | 18037 | 54334;54335;54336 | chr2:178564828;178564827;178564826 | chr2:179429555;179429554;179429553 |
Novex-1 | 18162 | 54709;54710;54711 | chr2:178564828;178564827;178564826 | chr2:179429555;179429554;179429553 |
Novex-2 | 18229 | 54910;54911;54912 | chr2:178564828;178564827;178564826 | chr2:179429555;179429554;179429553 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs760944577 | None | 0.003 | N | 0.469 | 0.122 | 0.273503213844 | gnomAD-4.0.0 | 2.05358E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 7.5861E-05 | None | 0 | 0 | 0 | 0 | 0 |
T/S | None | -1.005 | None | N | 0.279 | 0.176 | 0.110078149338 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/S | None | -1.005 | None | N | 0.279 | 0.176 | 0.110078149338 | gnomAD-4.0.0 | 6.84526E-07 | None | None | None | None | I | None | 0 | 2.23914E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0907 | likely_benign | 0.0909 | benign | -0.639 | Destabilizing | None | N | 0.283 | neutral | N | 0.39503509 | None | None | I |
T/C | 0.2125 | likely_benign | 0.2342 | benign | -0.334 | Destabilizing | 0.041 | N | 0.644 | neutral | None | None | None | None | I |
T/D | 0.6365 | likely_pathogenic | 0.5791 | pathogenic | 0.059 | Stabilizing | None | N | 0.399 | neutral | None | None | None | None | I |
T/E | 0.6613 | likely_pathogenic | 0.6191 | pathogenic | 0.026 | Stabilizing | None | N | 0.396 | neutral | None | None | None | None | I |
T/F | 0.479 | ambiguous | 0.4866 | ambiguous | -0.89 | Destabilizing | 0.018 | N | 0.564 | neutral | None | None | None | None | I |
T/G | 0.1744 | likely_benign | 0.1914 | benign | -0.851 | Destabilizing | None | N | 0.386 | neutral | None | None | None | None | I |
T/H | 0.4638 | ambiguous | 0.4539 | ambiguous | -1.165 | Destabilizing | 0.041 | N | 0.627 | neutral | None | None | None | None | I |
T/I | 0.4679 | ambiguous | 0.4298 | ambiguous | -0.183 | Destabilizing | 0.003 | N | 0.469 | neutral | N | 0.462414875 | None | None | I |
T/K | 0.6561 | likely_pathogenic | 0.6193 | pathogenic | -0.582 | Destabilizing | None | N | 0.4 | neutral | None | None | None | None | I |
T/L | 0.1895 | likely_benign | 0.178 | benign | -0.183 | Destabilizing | 0.002 | N | 0.425 | neutral | None | None | None | None | I |
T/M | 0.1511 | likely_benign | 0.1294 | benign | 0.093 | Stabilizing | 0.116 | N | 0.624 | neutral | None | None | None | None | I |
T/N | 0.1813 | likely_benign | 0.1599 | benign | -0.427 | Destabilizing | None | N | 0.385 | neutral | N | 0.425069995 | None | None | I |
T/P | 0.7815 | likely_pathogenic | 0.7646 | pathogenic | -0.303 | Destabilizing | 0.001 | N | 0.472 | neutral | N | 0.487715965 | None | None | I |
T/Q | 0.508 | ambiguous | 0.4758 | ambiguous | -0.612 | Destabilizing | 0.002 | N | 0.471 | neutral | None | None | None | None | I |
T/R | 0.572 | likely_pathogenic | 0.5428 | ambiguous | -0.342 | Destabilizing | 0.004 | N | 0.473 | neutral | None | None | None | None | I |
T/S | 0.0601 | likely_benign | 0.064 | benign | -0.692 | Destabilizing | None | N | 0.279 | neutral | N | 0.284192529 | None | None | I |
T/V | 0.3043 | likely_benign | 0.2779 | benign | -0.303 | Destabilizing | 0.002 | N | 0.429 | neutral | None | None | None | None | I |
T/W | 0.767 | likely_pathogenic | 0.7907 | pathogenic | -0.846 | Destabilizing | 0.316 | N | 0.624 | neutral | None | None | None | None | I |
T/Y | 0.4353 | ambiguous | 0.466 | ambiguous | -0.6 | Destabilizing | 0.018 | N | 0.572 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.