Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27103 | 81532;81533;81534 | chr2:178564825;178564824;178564823 | chr2:179429552;179429551;179429550 |
N2AB | 25462 | 76609;76610;76611 | chr2:178564825;178564824;178564823 | chr2:179429552;179429551;179429550 |
N2A | 24535 | 73828;73829;73830 | chr2:178564825;178564824;178564823 | chr2:179429552;179429551;179429550 |
N2B | 18038 | 54337;54338;54339 | chr2:178564825;178564824;178564823 | chr2:179429552;179429551;179429550 |
Novex-1 | 18163 | 54712;54713;54714 | chr2:178564825;178564824;178564823 | chr2:179429552;179429551;179429550 |
Novex-2 | 18230 | 54913;54914;54915 | chr2:178564825;178564824;178564823 | chr2:179429552;179429551;179429550 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs751284217 | 0.123 | 0.002 | N | 0.216 | 0.084 | 0.252681307341 | gnomAD-2.1.1 | 7.2E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.2E-05 | None | 0 | None | 0 | 7.9E-06 | 0 |
K/R | rs751284217 | 0.123 | 0.002 | N | 0.216 | 0.084 | 0.252681307341 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs751284217 | 0.123 | 0.002 | N | 0.216 | 0.084 | 0.252681307341 | gnomAD-4.0.0 | 2.02995E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40985E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.174 | likely_benign | 0.1657 | benign | -0.083 | Destabilizing | 0.004 | N | 0.132 | neutral | None | None | None | None | I |
K/C | 0.5317 | ambiguous | 0.5124 | ambiguous | -0.338 | Destabilizing | 0.983 | D | 0.445 | neutral | None | None | None | None | I |
K/D | 0.3318 | likely_benign | 0.3158 | benign | 0.065 | Stabilizing | 0.264 | N | 0.466 | neutral | None | None | None | None | I |
K/E | 0.1302 | likely_benign | 0.1227 | benign | 0.11 | Stabilizing | 0.007 | N | 0.186 | neutral | N | 0.459334498 | None | None | I |
K/F | 0.705 | likely_pathogenic | 0.6938 | pathogenic | -0.126 | Destabilizing | 0.836 | D | 0.477 | neutral | None | None | None | None | I |
K/G | 0.2717 | likely_benign | 0.2664 | benign | -0.328 | Destabilizing | 0.418 | N | 0.475 | neutral | None | None | None | None | I |
K/H | 0.2399 | likely_benign | 0.2362 | benign | -0.516 | Destabilizing | 0.836 | D | 0.454 | neutral | None | None | None | None | I |
K/I | 0.3319 | likely_benign | 0.3204 | benign | 0.496 | Stabilizing | 0.213 | N | 0.493 | neutral | N | 0.484273015 | None | None | I |
K/L | 0.2994 | likely_benign | 0.2865 | benign | 0.496 | Stabilizing | 0.129 | N | 0.475 | neutral | None | None | None | None | I |
K/M | 0.2323 | likely_benign | 0.2246 | benign | 0.105 | Stabilizing | 0.836 | D | 0.454 | neutral | None | None | None | None | I |
K/N | 0.2379 | likely_benign | 0.2252 | benign | 0.004 | Stabilizing | 0.351 | N | 0.373 | neutral | N | 0.5023387 | None | None | I |
K/P | 0.2487 | likely_benign | 0.2207 | benign | 0.332 | Stabilizing | 0.001 | N | 0.125 | neutral | None | None | None | None | I |
K/Q | 0.1061 | likely_benign | 0.1043 | benign | -0.077 | Destabilizing | 0.351 | N | 0.389 | neutral | N | 0.501991984 | None | None | I |
K/R | 0.0732 | likely_benign | 0.0752 | benign | -0.134 | Destabilizing | 0.002 | N | 0.216 | neutral | N | 0.442349034 | None | None | I |
K/S | 0.2355 | likely_benign | 0.2195 | benign | -0.479 | Destabilizing | 0.129 | N | 0.322 | neutral | None | None | None | None | I |
K/T | 0.1267 | likely_benign | 0.1213 | benign | -0.265 | Destabilizing | 0.351 | N | 0.425 | neutral | N | 0.461414798 | None | None | I |
K/V | 0.2522 | likely_benign | 0.2373 | benign | 0.332 | Stabilizing | 0.002 | N | 0.263 | neutral | None | None | None | None | I |
K/W | 0.7172 | likely_pathogenic | 0.7167 | pathogenic | -0.146 | Destabilizing | 0.983 | D | 0.488 | neutral | None | None | None | None | I |
K/Y | 0.5527 | ambiguous | 0.5423 | ambiguous | 0.187 | Stabilizing | 0.94 | D | 0.475 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.