Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27117 | 81574;81575;81576 | chr2:178564783;178564782;178564781 | chr2:179429510;179429509;179429508 |
N2AB | 25476 | 76651;76652;76653 | chr2:178564783;178564782;178564781 | chr2:179429510;179429509;179429508 |
N2A | 24549 | 73870;73871;73872 | chr2:178564783;178564782;178564781 | chr2:179429510;179429509;179429508 |
N2B | 18052 | 54379;54380;54381 | chr2:178564783;178564782;178564781 | chr2:179429510;179429509;179429508 |
Novex-1 | 18177 | 54754;54755;54756 | chr2:178564783;178564782;178564781 | chr2:179429510;179429509;179429508 |
Novex-2 | 18244 | 54955;54956;54957 | chr2:178564783;178564782;178564781 | chr2:179429510;179429509;179429508 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1326162454 | -0.344 | 0.99 | N | 0.561 | 0.393 | 0.615732620514 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.29E-05 | None | 0 | 0 | 0 |
I/T | rs1326162454 | -0.344 | 0.99 | N | 0.561 | 0.393 | 0.615732620514 | gnomAD-4.0.0 | 3.19026E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.87183E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8846 | likely_pathogenic | 0.844 | pathogenic | -0.525 | Destabilizing | 0.993 | D | 0.55 | neutral | None | None | None | None | I |
I/C | 0.9644 | likely_pathogenic | 0.953 | pathogenic | -0.89 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
I/D | 0.9814 | likely_pathogenic | 0.972 | pathogenic | -0.179 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | I |
I/E | 0.9801 | likely_pathogenic | 0.9684 | pathogenic | -0.257 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
I/F | 0.55 | ambiguous | 0.4858 | ambiguous | -0.645 | Destabilizing | 0.994 | D | 0.583 | neutral | N | 0.479091012 | None | None | I |
I/G | 0.9722 | likely_pathogenic | 0.9597 | pathogenic | -0.619 | Destabilizing | 0.999 | D | 0.638 | neutral | None | None | None | None | I |
I/H | 0.9451 | likely_pathogenic | 0.9263 | pathogenic | 0.08 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
I/K | 0.9388 | likely_pathogenic | 0.9111 | pathogenic | -0.387 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | I |
I/L | 0.1909 | likely_benign | 0.153 | benign | -0.385 | Destabilizing | 0.061 | N | 0.262 | neutral | N | 0.452024523 | None | None | I |
I/M | 0.3533 | ambiguous | 0.2965 | benign | -0.712 | Destabilizing | 0.994 | D | 0.581 | neutral | N | 0.514054417 | None | None | I |
I/N | 0.8707 | likely_pathogenic | 0.8279 | pathogenic | -0.3 | Destabilizing | 0.999 | D | 0.653 | neutral | N | 0.474975954 | None | None | I |
I/P | 0.916 | likely_pathogenic | 0.9015 | pathogenic | -0.406 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | I |
I/Q | 0.9501 | likely_pathogenic | 0.9295 | pathogenic | -0.441 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | I |
I/R | 0.8825 | likely_pathogenic | 0.8435 | pathogenic | 0.051 | Stabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | I |
I/S | 0.8617 | likely_pathogenic | 0.8187 | pathogenic | -0.702 | Destabilizing | 0.999 | D | 0.579 | neutral | N | 0.475842745 | None | None | I |
I/T | 0.9153 | likely_pathogenic | 0.8879 | pathogenic | -0.682 | Destabilizing | 0.99 | D | 0.561 | neutral | N | 0.502239913 | None | None | I |
I/V | 0.2473 | likely_benign | 0.2081 | benign | -0.406 | Destabilizing | 0.817 | D | 0.503 | neutral | N | 0.488118609 | None | None | I |
I/W | 0.9555 | likely_pathogenic | 0.9457 | pathogenic | -0.652 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | I |
I/Y | 0.8517 | likely_pathogenic | 0.8232 | pathogenic | -0.441 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.