Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27120 | 81583;81584;81585 | chr2:178564774;178564773;178564772 | chr2:179429501;179429500;179429499 |
N2AB | 25479 | 76660;76661;76662 | chr2:178564774;178564773;178564772 | chr2:179429501;179429500;179429499 |
N2A | 24552 | 73879;73880;73881 | chr2:178564774;178564773;178564772 | chr2:179429501;179429500;179429499 |
N2B | 18055 | 54388;54389;54390 | chr2:178564774;178564773;178564772 | chr2:179429501;179429500;179429499 |
Novex-1 | 18180 | 54763;54764;54765 | chr2:178564774;178564773;178564772 | chr2:179429501;179429500;179429499 |
Novex-2 | 18247 | 54964;54965;54966 | chr2:178564774;178564773;178564772 | chr2:179429501;179429500;179429499 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1015972053 | None | None | N | 0.157 | 0.182 | 0.319402600006 | gnomAD-4.0.0 | 7.53498E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.90129E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1546 | likely_benign | 0.1393 | benign | -1.006 | Destabilizing | None | N | 0.117 | neutral | N | 0.481982071 | None | None | N |
V/C | 0.4951 | ambiguous | 0.5056 | ambiguous | -0.726 | Destabilizing | 0.667 | D | 0.318 | neutral | None | None | None | None | N |
V/D | 0.4101 | ambiguous | 0.4037 | ambiguous | -0.646 | Destabilizing | 0.175 | N | 0.318 | neutral | N | 0.485638452 | None | None | N |
V/E | 0.2852 | likely_benign | 0.2701 | benign | -0.665 | Destabilizing | 0.22 | N | 0.313 | neutral | None | None | None | None | N |
V/F | 0.1583 | likely_benign | 0.1606 | benign | -0.72 | Destabilizing | 0.175 | N | 0.387 | neutral | N | 0.497836958 | None | None | N |
V/G | 0.1776 | likely_benign | 0.1736 | benign | -1.269 | Destabilizing | 0.042 | N | 0.303 | neutral | N | 0.519193665 | None | None | N |
V/H | 0.376 | ambiguous | 0.3829 | ambiguous | -0.658 | Destabilizing | 0.859 | D | 0.333 | neutral | None | None | None | None | N |
V/I | 0.0709 | likely_benign | 0.0746 | benign | -0.408 | Destabilizing | None | N | 0.157 | neutral | N | 0.438692654 | None | None | N |
V/K | 0.2436 | likely_benign | 0.2315 | benign | -0.878 | Destabilizing | 0.22 | N | 0.299 | neutral | None | None | None | None | N |
V/L | 0.1292 | likely_benign | 0.1318 | benign | -0.408 | Destabilizing | 0.007 | N | 0.159 | neutral | N | 0.483502223 | None | None | N |
V/M | 0.0982 | likely_benign | 0.0988 | benign | -0.421 | Destabilizing | 0.025 | N | 0.158 | neutral | None | None | None | None | N |
V/N | 0.1566 | likely_benign | 0.1597 | benign | -0.727 | Destabilizing | 0.22 | N | 0.361 | neutral | None | None | None | None | N |
V/P | 0.8836 | likely_pathogenic | 0.8856 | pathogenic | -0.571 | Destabilizing | 0.364 | N | 0.335 | neutral | None | None | None | None | N |
V/Q | 0.1993 | likely_benign | 0.1907 | benign | -0.885 | Destabilizing | 0.667 | D | 0.394 | neutral | None | None | None | None | N |
V/R | 0.2489 | likely_benign | 0.2369 | benign | -0.347 | Destabilizing | 0.22 | N | 0.401 | neutral | None | None | None | None | N |
V/S | 0.1532 | likely_benign | 0.1459 | benign | -1.207 | Destabilizing | 0.011 | N | 0.259 | neutral | None | None | None | None | N |
V/T | 0.1258 | likely_benign | 0.1167 | benign | -1.12 | Destabilizing | 0.001 | N | 0.087 | neutral | None | None | None | None | N |
V/W | 0.7314 | likely_pathogenic | 0.7419 | pathogenic | -0.878 | Destabilizing | 0.958 | D | 0.354 | neutral | None | None | None | None | N |
V/Y | 0.3773 | ambiguous | 0.3938 | ambiguous | -0.583 | Destabilizing | 0.667 | D | 0.372 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.