Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27123 | 81592;81593;81594 | chr2:178564765;178564764;178564763 | chr2:179429492;179429491;179429490 |
N2AB | 25482 | 76669;76670;76671 | chr2:178564765;178564764;178564763 | chr2:179429492;179429491;179429490 |
N2A | 24555 | 73888;73889;73890 | chr2:178564765;178564764;178564763 | chr2:179429492;179429491;179429490 |
N2B | 18058 | 54397;54398;54399 | chr2:178564765;178564764;178564763 | chr2:179429492;179429491;179429490 |
Novex-1 | 18183 | 54772;54773;54774 | chr2:178564765;178564764;178564763 | chr2:179429492;179429491;179429490 |
Novex-2 | 18250 | 54973;54974;54975 | chr2:178564765;178564764;178564763 | chr2:179429492;179429491;179429490 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1170042602 | None | 0.999 | N | 0.581 | 0.393 | 0.272639205421 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
N/T | None | None | 0.999 | N | 0.681 | 0.433 | 0.319686207203 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7776 | likely_pathogenic | 0.7702 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
N/C | 0.4562 | ambiguous | 0.4583 | ambiguous | -0.093 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
N/D | 0.7981 | likely_pathogenic | 0.7646 | pathogenic | -1.104 | Destabilizing | 0.999 | D | 0.62 | neutral | N | 0.488031462 | None | None | N |
N/E | 0.9649 | likely_pathogenic | 0.9616 | pathogenic | -0.879 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
N/F | 0.976 | likely_pathogenic | 0.9756 | pathogenic | -0.428 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
N/G | 0.6161 | likely_pathogenic | 0.6025 | pathogenic | -1.396 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | N |
N/H | 0.5561 | ambiguous | 0.5467 | ambiguous | -0.94 | Destabilizing | 1.0 | D | 0.756 | deleterious | N | 0.48929891 | None | None | N |
N/I | 0.8705 | likely_pathogenic | 0.8762 | pathogenic | 0.206 | Stabilizing | 1.0 | D | 0.765 | deleterious | N | 0.487132863 | None | None | N |
N/K | 0.9763 | likely_pathogenic | 0.9734 | pathogenic | -0.164 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | N | 0.484815458 | None | None | N |
N/L | 0.8081 | likely_pathogenic | 0.8023 | pathogenic | 0.206 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
N/M | 0.8629 | likely_pathogenic | 0.8526 | pathogenic | 0.499 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
N/P | 0.9421 | likely_pathogenic | 0.937 | pathogenic | -0.153 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
N/Q | 0.9056 | likely_pathogenic | 0.8953 | pathogenic | -0.691 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
N/R | 0.96 | likely_pathogenic | 0.9548 | pathogenic | -0.457 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
N/S | 0.1378 | likely_benign | 0.1281 | benign | -1.127 | Destabilizing | 0.999 | D | 0.581 | neutral | N | 0.46772148 | None | None | N |
N/T | 0.3357 | likely_benign | 0.2762 | benign | -0.687 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | N | 0.508320523 | None | None | N |
N/V | 0.8003 | likely_pathogenic | 0.8112 | pathogenic | -0.153 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
N/W | 0.989 | likely_pathogenic | 0.989 | pathogenic | -0.26 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
N/Y | 0.8604 | likely_pathogenic | 0.855 | pathogenic | 0.044 | Stabilizing | 1.0 | D | 0.746 | deleterious | N | 0.496642744 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.