Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27124 | 81595;81596;81597 | chr2:178564762;178564761;178564760 | chr2:179429489;179429488;179429487 |
N2AB | 25483 | 76672;76673;76674 | chr2:178564762;178564761;178564760 | chr2:179429489;179429488;179429487 |
N2A | 24556 | 73891;73892;73893 | chr2:178564762;178564761;178564760 | chr2:179429489;179429488;179429487 |
N2B | 18059 | 54400;54401;54402 | chr2:178564762;178564761;178564760 | chr2:179429489;179429488;179429487 |
Novex-1 | 18184 | 54775;54776;54777 | chr2:178564762;178564761;178564760 | chr2:179429489;179429488;179429487 |
Novex-2 | 18251 | 54976;54977;54978 | chr2:178564762;178564761;178564760 | chr2:179429489;179429488;179429487 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.884 | N | 0.361 | 0.144 | 0.228597637076 | gnomAD-4.0.0 | 6.84961E-07 | None | None | None | None | I | None | 2.99168E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6379 | likely_pathogenic | 0.6315 | pathogenic | 0.007 | Stabilizing | 0.998 | D | 0.544 | neutral | None | None | None | None | I |
K/C | 0.8469 | likely_pathogenic | 0.8425 | pathogenic | -0.408 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
K/D | 0.755 | likely_pathogenic | 0.7392 | pathogenic | -0.249 | Destabilizing | 0.998 | D | 0.522 | neutral | None | None | None | None | I |
K/E | 0.4935 | ambiguous | 0.4774 | ambiguous | -0.27 | Destabilizing | 0.996 | D | 0.543 | neutral | N | 0.498084887 | None | None | I |
K/F | 0.9363 | likely_pathogenic | 0.9393 | pathogenic | -0.365 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | I |
K/G | 0.6591 | likely_pathogenic | 0.6465 | pathogenic | -0.106 | Destabilizing | 0.997 | D | 0.49 | neutral | None | None | None | None | I |
K/H | 0.4487 | ambiguous | 0.442 | ambiguous | -0.228 | Destabilizing | 1.0 | D | 0.591 | neutral | None | None | None | None | I |
K/I | 0.7111 | likely_pathogenic | 0.737 | pathogenic | 0.22 | Stabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | I |
K/L | 0.6901 | likely_pathogenic | 0.6945 | pathogenic | 0.22 | Stabilizing | 1.0 | D | 0.489 | neutral | None | None | None | None | I |
K/M | 0.5698 | likely_pathogenic | 0.577 | pathogenic | -0.065 | Destabilizing | 1.0 | D | 0.595 | neutral | N | 0.485763283 | None | None | I |
K/N | 0.6468 | likely_pathogenic | 0.6453 | pathogenic | 0.059 | Stabilizing | 0.884 | D | 0.361 | neutral | N | 0.506165652 | None | None | I |
K/P | 0.7699 | likely_pathogenic | 0.7531 | pathogenic | 0.172 | Stabilizing | 1.0 | D | 0.569 | neutral | None | None | None | None | I |
K/Q | 0.2663 | likely_benign | 0.2529 | benign | -0.096 | Destabilizing | 0.999 | D | 0.621 | neutral | N | 0.472836815 | None | None | I |
K/R | 0.0863 | likely_benign | 0.0853 | benign | -0.098 | Destabilizing | 0.998 | D | 0.551 | neutral | N | 0.497372811 | None | None | I |
K/S | 0.6582 | likely_pathogenic | 0.637 | pathogenic | -0.313 | Destabilizing | 0.997 | D | 0.548 | neutral | None | None | None | None | I |
K/T | 0.4003 | ambiguous | 0.3954 | ambiguous | -0.223 | Destabilizing | 0.999 | D | 0.54 | neutral | N | 0.49521794 | None | None | I |
K/V | 0.6556 | likely_pathogenic | 0.6673 | pathogenic | 0.172 | Stabilizing | 1.0 | D | 0.562 | neutral | None | None | None | None | I |
K/W | 0.8962 | likely_pathogenic | 0.8964 | pathogenic | -0.466 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
K/Y | 0.8139 | likely_pathogenic | 0.8223 | pathogenic | -0.112 | Destabilizing | 1.0 | D | 0.591 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.