Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27136 | 81631;81632;81633 | chr2:178564726;178564725;178564724 | chr2:179429453;179429452;179429451 |
N2AB | 25495 | 76708;76709;76710 | chr2:178564726;178564725;178564724 | chr2:179429453;179429452;179429451 |
N2A | 24568 | 73927;73928;73929 | chr2:178564726;178564725;178564724 | chr2:179429453;179429452;179429451 |
N2B | 18071 | 54436;54437;54438 | chr2:178564726;178564725;178564724 | chr2:179429453;179429452;179429451 |
Novex-1 | 18196 | 54811;54812;54813 | chr2:178564726;178564725;178564724 | chr2:179429453;179429452;179429451 |
Novex-2 | 18263 | 55012;55013;55014 | chr2:178564726;178564725;178564724 | chr2:179429453;179429452;179429451 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs879200560 | None | 0.201 | N | 0.368 | 0.229 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
G/A | rs879200560 | None | 0.201 | N | 0.368 | 0.229 | None | gnomAD-4.0.0 | 2.47974E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39107E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1359 | likely_benign | 0.1646 | benign | -0.379 | Destabilizing | 0.201 | N | 0.368 | neutral | N | 0.488292314 | None | None | N |
G/C | 0.173 | likely_benign | 0.1899 | benign | -0.886 | Destabilizing | 0.992 | D | 0.56 | neutral | None | None | None | None | N |
G/D | 0.2289 | likely_benign | 0.2455 | benign | -0.645 | Destabilizing | 0.005 | N | 0.262 | neutral | None | None | None | None | N |
G/E | 0.2811 | likely_benign | 0.3172 | benign | -0.803 | Destabilizing | 0.016 | N | 0.336 | neutral | N | 0.507115376 | None | None | N |
G/F | 0.5078 | ambiguous | 0.5584 | ambiguous | -1.069 | Destabilizing | 0.92 | D | 0.53 | neutral | None | None | None | None | N |
G/H | 0.3216 | likely_benign | 0.3459 | ambiguous | -0.644 | Destabilizing | 0.977 | D | 0.468 | neutral | None | None | None | None | N |
G/I | 0.3427 | ambiguous | 0.3857 | ambiguous | -0.468 | Destabilizing | 0.85 | D | 0.526 | neutral | None | None | None | None | N |
G/K | 0.4013 | ambiguous | 0.4431 | ambiguous | -0.913 | Destabilizing | 0.617 | D | 0.423 | neutral | None | None | None | None | N |
G/L | 0.3911 | ambiguous | 0.455 | ambiguous | -0.468 | Destabilizing | 0.739 | D | 0.489 | neutral | None | None | None | None | N |
G/M | 0.4148 | ambiguous | 0.4514 | ambiguous | -0.47 | Destabilizing | 0.977 | D | 0.527 | neutral | None | None | None | None | N |
G/N | 0.1764 | likely_benign | 0.1859 | benign | -0.548 | Destabilizing | 0.021 | N | 0.267 | neutral | None | None | None | None | N |
G/P | 0.7918 | likely_pathogenic | 0.849 | pathogenic | -0.404 | Destabilizing | 0.92 | D | 0.457 | neutral | None | None | None | None | N |
G/Q | 0.3008 | likely_benign | 0.3321 | benign | -0.838 | Destabilizing | 0.85 | D | 0.465 | neutral | None | None | None | None | N |
G/R | 0.2925 | likely_benign | 0.3301 | benign | -0.447 | Destabilizing | 0.81 | D | 0.462 | neutral | N | 0.512465267 | None | None | N |
G/S | 0.0982 | likely_benign | 0.1055 | benign | -0.701 | Destabilizing | 0.447 | N | 0.355 | neutral | None | None | None | None | N |
G/T | 0.1725 | likely_benign | 0.1969 | benign | -0.788 | Destabilizing | 0.005 | N | 0.329 | neutral | None | None | None | None | N |
G/V | 0.247 | likely_benign | 0.2881 | benign | -0.404 | Destabilizing | 0.681 | D | 0.494 | neutral | N | 0.518677927 | None | None | N |
G/W | 0.4302 | ambiguous | 0.4574 | ambiguous | -1.232 | Destabilizing | 0.99 | D | 0.558 | neutral | D | 0.530541211 | None | None | N |
G/Y | 0.3733 | ambiguous | 0.4015 | ambiguous | -0.881 | Destabilizing | 0.972 | D | 0.529 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.