Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27139 | 81640;81641;81642 | chr2:178564717;178564716;178564715 | chr2:179429444;179429443;179429442 |
N2AB | 25498 | 76717;76718;76719 | chr2:178564717;178564716;178564715 | chr2:179429444;179429443;179429442 |
N2A | 24571 | 73936;73937;73938 | chr2:178564717;178564716;178564715 | chr2:179429444;179429443;179429442 |
N2B | 18074 | 54445;54446;54447 | chr2:178564717;178564716;178564715 | chr2:179429444;179429443;179429442 |
Novex-1 | 18199 | 54820;54821;54822 | chr2:178564717;178564716;178564715 | chr2:179429444;179429443;179429442 |
Novex-2 | 18266 | 55021;55022;55023 | chr2:178564717;178564716;178564715 | chr2:179429444;179429443;179429442 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs763198311 | -0.172 | 0.998 | N | 0.654 | 0.427 | 0.583897100485 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
E/K | rs763198311 | -0.172 | 0.998 | N | 0.654 | 0.427 | 0.583897100485 | gnomAD-4.0.0 | 2.05336E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31959E-05 | 1.65766E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3052 | likely_benign | 0.2396 | benign | -0.516 | Destabilizing | 0.998 | D | 0.644 | neutral | N | 0.481115247 | None | None | N |
E/C | 0.9467 | likely_pathogenic | 0.9262 | pathogenic | -0.076 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/D | 0.3685 | ambiguous | 0.3297 | benign | -0.816 | Destabilizing | 0.434 | N | 0.204 | neutral | N | 0.506060039 | None | None | N |
E/F | 0.96 | likely_pathogenic | 0.939 | pathogenic | -0.542 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/G | 0.5098 | ambiguous | 0.4435 | ambiguous | -0.774 | Destabilizing | 0.999 | D | 0.622 | neutral | N | 0.509440627 | None | None | N |
E/H | 0.8766 | likely_pathogenic | 0.8266 | pathogenic | -0.751 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/I | 0.6983 | likely_pathogenic | 0.6192 | pathogenic | 0.145 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/K | 0.4693 | ambiguous | 0.3538 | ambiguous | -0.19 | Destabilizing | 0.998 | D | 0.654 | neutral | N | 0.48792933 | None | None | N |
E/L | 0.8183 | likely_pathogenic | 0.7412 | pathogenic | 0.145 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/M | 0.8007 | likely_pathogenic | 0.7216 | pathogenic | 0.499 | Stabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
E/N | 0.6619 | likely_pathogenic | 0.6044 | pathogenic | -0.384 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/P | 0.6927 | likely_pathogenic | 0.6056 | pathogenic | -0.054 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
E/Q | 0.3861 | ambiguous | 0.3013 | benign | -0.349 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | N | 0.485549474 | None | None | N |
E/R | 0.6598 | likely_pathogenic | 0.551 | ambiguous | -0.074 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/S | 0.4767 | ambiguous | 0.3971 | ambiguous | -0.602 | Destabilizing | 0.997 | D | 0.663 | neutral | None | None | None | None | N |
E/T | 0.5399 | ambiguous | 0.4591 | ambiguous | -0.409 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/V | 0.4893 | ambiguous | 0.4075 | ambiguous | -0.054 | Destabilizing | 1.0 | D | 0.669 | neutral | N | 0.517580928 | None | None | N |
E/W | 0.9919 | likely_pathogenic | 0.9866 | pathogenic | -0.469 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/Y | 0.9393 | likely_pathogenic | 0.9073 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.