Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27157 | 81694;81695;81696 | chr2:178564663;178564662;178564661 | chr2:179429390;179429389;179429388 |
N2AB | 25516 | 76771;76772;76773 | chr2:178564663;178564662;178564661 | chr2:179429390;179429389;179429388 |
N2A | 24589 | 73990;73991;73992 | chr2:178564663;178564662;178564661 | chr2:179429390;179429389;179429388 |
N2B | 18092 | 54499;54500;54501 | chr2:178564663;178564662;178564661 | chr2:179429390;179429389;179429388 |
Novex-1 | 18217 | 54874;54875;54876 | chr2:178564663;178564662;178564661 | chr2:179429390;179429389;179429388 |
Novex-2 | 18284 | 55075;55076;55077 | chr2:178564663;178564662;178564661 | chr2:179429390;179429389;179429388 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.007 | N | 0.246 | 0.077 | 0.0986583533028 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.595 | likely_pathogenic | 0.5428 | ambiguous | -0.041 | Destabilizing | 0.543 | D | 0.493 | neutral | None | None | None | None | I |
K/C | 0.8032 | likely_pathogenic | 0.7785 | pathogenic | -0.298 | Destabilizing | 0.996 | D | 0.532 | neutral | None | None | None | None | I |
K/D | 0.8582 | likely_pathogenic | 0.8198 | pathogenic | -0.009 | Destabilizing | 0.59 | D | 0.498 | neutral | None | None | None | None | I |
K/E | 0.4695 | ambiguous | 0.4085 | ambiguous | -0.003 | Destabilizing | 0.028 | N | 0.152 | neutral | N | 0.436593711 | None | None | I |
K/F | 0.8774 | likely_pathogenic | 0.843 | pathogenic | -0.233 | Destabilizing | 0.984 | D | 0.505 | neutral | None | None | None | None | I |
K/G | 0.7269 | likely_pathogenic | 0.6783 | pathogenic | -0.243 | Destabilizing | 0.59 | D | 0.505 | neutral | None | None | None | None | I |
K/H | 0.4799 | ambiguous | 0.4376 | ambiguous | -0.493 | Destabilizing | 0.953 | D | 0.544 | neutral | None | None | None | None | I |
K/I | 0.5472 | ambiguous | 0.4866 | ambiguous | 0.415 | Stabilizing | 0.953 | D | 0.511 | neutral | None | None | None | None | I |
K/L | 0.5369 | ambiguous | 0.4844 | ambiguous | 0.415 | Stabilizing | 0.854 | D | 0.561 | neutral | None | None | None | None | I |
K/M | 0.4552 | ambiguous | 0.4016 | ambiguous | 0.212 | Stabilizing | 0.994 | D | 0.537 | neutral | N | 0.496487705 | None | None | I |
K/N | 0.7161 | likely_pathogenic | 0.6577 | pathogenic | 0.118 | Stabilizing | 0.007 | N | 0.246 | neutral | N | 0.52128982 | None | None | I |
K/P | 0.5986 | likely_pathogenic | 0.5972 | pathogenic | 0.291 | Stabilizing | 0.004 | N | 0.163 | neutral | None | None | None | None | I |
K/Q | 0.2558 | likely_benign | 0.226 | benign | -0.071 | Destabilizing | 0.684 | D | 0.585 | neutral | N | 0.504165497 | None | None | I |
K/R | 0.1016 | likely_benign | 0.0996 | benign | -0.08 | Destabilizing | 0.684 | D | 0.538 | neutral | N | 0.493929861 | None | None | I |
K/S | 0.7034 | likely_pathogenic | 0.6533 | pathogenic | -0.376 | Destabilizing | 0.373 | N | 0.444 | neutral | None | None | None | None | I |
K/T | 0.4624 | ambiguous | 0.4073 | ambiguous | -0.22 | Destabilizing | 0.684 | D | 0.547 | neutral | N | 0.521385821 | None | None | I |
K/V | 0.5323 | ambiguous | 0.4722 | ambiguous | 0.291 | Stabilizing | 0.854 | D | 0.547 | neutral | None | None | None | None | I |
K/W | 0.8861 | likely_pathogenic | 0.8647 | pathogenic | -0.227 | Destabilizing | 0.996 | D | 0.637 | neutral | None | None | None | None | I |
K/Y | 0.7714 | likely_pathogenic | 0.7267 | pathogenic | 0.12 | Stabilizing | 0.984 | D | 0.505 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.