Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2716 | 8371;8372;8373 | chr2:178770646;178770645;178770644 | chr2:179635373;179635372;179635371 |
N2AB | 2716 | 8371;8372;8373 | chr2:178770646;178770645;178770644 | chr2:179635373;179635372;179635371 |
N2A | 2716 | 8371;8372;8373 | chr2:178770646;178770645;178770644 | chr2:179635373;179635372;179635371 |
N2B | 2670 | 8233;8234;8235 | chr2:178770646;178770645;178770644 | chr2:179635373;179635372;179635371 |
Novex-1 | 2670 | 8233;8234;8235 | chr2:178770646;178770645;178770644 | chr2:179635373;179635372;179635371 |
Novex-2 | 2670 | 8233;8234;8235 | chr2:178770646;178770645;178770644 | chr2:179635373;179635372;179635371 |
Novex-3 | 2716 | 8371;8372;8373 | chr2:178770646;178770645;178770644 | chr2:179635373;179635372;179635371 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs752870590 | -0.756 | 0.984 | D | 0.59 | 0.608 | 0.861400942078 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 2.89E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/P | rs752870590 | -0.756 | 0.984 | D | 0.59 | 0.608 | 0.861400942078 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/P | rs752870590 | -0.756 | 0.984 | D | 0.59 | 0.608 | 0.861400942078 | gnomAD-4.0.0 | 5.12554E-06 | None | None | None | None | N | None | 0 | 6.77897E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3066 | likely_benign | 0.343 | ambiguous | -0.637 | Destabilizing | 0.919 | D | 0.441 | neutral | None | None | None | None | N |
L/C | 0.561 | ambiguous | 0.5986 | pathogenic | -0.668 | Destabilizing | 0.999 | D | 0.471 | neutral | None | None | None | None | N |
L/D | 0.8396 | likely_pathogenic | 0.8772 | pathogenic | -0.091 | Destabilizing | 0.976 | D | 0.538 | neutral | None | None | None | None | N |
L/E | 0.3306 | likely_benign | 0.3694 | ambiguous | -0.138 | Destabilizing | 0.851 | D | 0.495 | neutral | None | None | None | None | N |
L/F | 0.2465 | likely_benign | 0.2733 | benign | -0.531 | Destabilizing | 0.995 | D | 0.419 | neutral | D | 0.604200867 | None | None | N |
L/G | 0.7817 | likely_pathogenic | 0.8268 | pathogenic | -0.822 | Destabilizing | 0.976 | D | 0.536 | neutral | None | None | None | None | N |
L/H | 0.3108 | likely_benign | 0.3501 | ambiguous | -0.093 | Destabilizing | 0.996 | D | 0.605 | neutral | D | 0.606224862 | None | None | N |
L/I | 0.0725 | likely_benign | 0.0738 | benign | -0.248 | Destabilizing | 0.946 | D | 0.417 | neutral | N | 0.510168819 | None | None | N |
L/K | 0.2626 | likely_benign | 0.2821 | benign | -0.367 | Destabilizing | 0.851 | D | 0.477 | neutral | None | None | None | None | N |
L/M | 0.0914 | likely_benign | 0.0884 | benign | -0.537 | Destabilizing | 0.996 | D | 0.458 | neutral | None | None | None | None | N |
L/N | 0.5376 | ambiguous | 0.5842 | pathogenic | -0.257 | Destabilizing | 0.976 | D | 0.57 | neutral | None | None | None | None | N |
L/P | 0.9818 | likely_pathogenic | 0.9889 | pathogenic | -0.347 | Destabilizing | 0.984 | D | 0.59 | neutral | D | 0.606224862 | None | None | N |
L/Q | 0.1082 | likely_benign | 0.1162 | benign | -0.377 | Destabilizing | 0.06 | N | 0.289 | neutral | None | None | None | None | N |
L/R | 0.2241 | likely_benign | 0.247 | benign | 0.055 | Stabilizing | 0.938 | D | 0.509 | neutral | D | 0.605246877 | None | None | N |
L/S | 0.388 | ambiguous | 0.4445 | ambiguous | -0.706 | Destabilizing | 0.919 | D | 0.499 | neutral | None | None | None | None | N |
L/T | 0.2275 | likely_benign | 0.2405 | benign | -0.639 | Destabilizing | 0.919 | D | 0.437 | neutral | None | None | None | None | N |
L/V | 0.0786 | likely_benign | 0.0805 | benign | -0.347 | Destabilizing | 0.946 | D | 0.452 | neutral | N | 0.481981847 | None | None | N |
L/W | 0.4765 | ambiguous | 0.553 | ambiguous | -0.59 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
L/Y | 0.5068 | ambiguous | 0.5589 | ambiguous | -0.337 | Destabilizing | 0.996 | D | 0.451 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.