Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC27168371;8372;8373 chr2:178770646;178770645;178770644chr2:179635373;179635372;179635371
N2AB27168371;8372;8373 chr2:178770646;178770645;178770644chr2:179635373;179635372;179635371
N2A27168371;8372;8373 chr2:178770646;178770645;178770644chr2:179635373;179635372;179635371
N2B26708233;8234;8235 chr2:178770646;178770645;178770644chr2:179635373;179635372;179635371
Novex-126708233;8234;8235 chr2:178770646;178770645;178770644chr2:179635373;179635372;179635371
Novex-226708233;8234;8235 chr2:178770646;178770645;178770644chr2:179635373;179635372;179635371
Novex-327168371;8372;8373 chr2:178770646;178770645;178770644chr2:179635373;179635372;179635371

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTC
  • RefSeq wild type template codon: GAG
  • Domain: Ig-17
  • Domain position: 10
  • Structural Position: 13
  • Q(SASA): 0.3273
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P rs752870590 -0.756 0.984 D 0.59 0.608 0.861400942078 gnomAD-2.1.1 3.99E-06 None None None None N None 0 2.89E-05 None 0 0 None 0 None 0 0 0
L/P rs752870590 -0.756 0.984 D 0.59 0.608 0.861400942078 gnomAD-3.1.2 6.57E-06 None None None None N None 0 6.55E-05 0 0 0 None 0 0 0 0 0
L/P rs752870590 -0.756 0.984 D 0.59 0.608 0.861400942078 gnomAD-4.0.0 5.12554E-06 None None None None N None 0 6.77897E-05 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.3066 likely_benign 0.343 ambiguous -0.637 Destabilizing 0.919 D 0.441 neutral None None None None N
L/C 0.561 ambiguous 0.5986 pathogenic -0.668 Destabilizing 0.999 D 0.471 neutral None None None None N
L/D 0.8396 likely_pathogenic 0.8772 pathogenic -0.091 Destabilizing 0.976 D 0.538 neutral None None None None N
L/E 0.3306 likely_benign 0.3694 ambiguous -0.138 Destabilizing 0.851 D 0.495 neutral None None None None N
L/F 0.2465 likely_benign 0.2733 benign -0.531 Destabilizing 0.995 D 0.419 neutral D 0.604200867 None None N
L/G 0.7817 likely_pathogenic 0.8268 pathogenic -0.822 Destabilizing 0.976 D 0.536 neutral None None None None N
L/H 0.3108 likely_benign 0.3501 ambiguous -0.093 Destabilizing 0.996 D 0.605 neutral D 0.606224862 None None N
L/I 0.0725 likely_benign 0.0738 benign -0.248 Destabilizing 0.946 D 0.417 neutral N 0.510168819 None None N
L/K 0.2626 likely_benign 0.2821 benign -0.367 Destabilizing 0.851 D 0.477 neutral None None None None N
L/M 0.0914 likely_benign 0.0884 benign -0.537 Destabilizing 0.996 D 0.458 neutral None None None None N
L/N 0.5376 ambiguous 0.5842 pathogenic -0.257 Destabilizing 0.976 D 0.57 neutral None None None None N
L/P 0.9818 likely_pathogenic 0.9889 pathogenic -0.347 Destabilizing 0.984 D 0.59 neutral D 0.606224862 None None N
L/Q 0.1082 likely_benign 0.1162 benign -0.377 Destabilizing 0.06 N 0.289 neutral None None None None N
L/R 0.2241 likely_benign 0.247 benign 0.055 Stabilizing 0.938 D 0.509 neutral D 0.605246877 None None N
L/S 0.388 ambiguous 0.4445 ambiguous -0.706 Destabilizing 0.919 D 0.499 neutral None None None None N
L/T 0.2275 likely_benign 0.2405 benign -0.639 Destabilizing 0.919 D 0.437 neutral None None None None N
L/V 0.0786 likely_benign 0.0805 benign -0.347 Destabilizing 0.946 D 0.452 neutral N 0.481981847 None None N
L/W 0.4765 ambiguous 0.553 ambiguous -0.59 Destabilizing 0.999 D 0.599 neutral None None None None N
L/Y 0.5068 ambiguous 0.5589 ambiguous -0.337 Destabilizing 0.996 D 0.451 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.