Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27160 | 81703;81704;81705 | chr2:178564654;178564653;178564652 | chr2:179429381;179429380;179429379 |
N2AB | 25519 | 76780;76781;76782 | chr2:178564654;178564653;178564652 | chr2:179429381;179429380;179429379 |
N2A | 24592 | 73999;74000;74001 | chr2:178564654;178564653;178564652 | chr2:179429381;179429380;179429379 |
N2B | 18095 | 54508;54509;54510 | chr2:178564654;178564653;178564652 | chr2:179429381;179429380;179429379 |
Novex-1 | 18220 | 54883;54884;54885 | chr2:178564654;178564653;178564652 | chr2:179429381;179429380;179429379 |
Novex-2 | 18287 | 55084;55085;55086 | chr2:178564654;178564653;178564652 | chr2:179429381;179429380;179429379 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs764904296 | 0.17 | 0.883 | N | 0.58 | 0.183 | 0.181679512989 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66113E-04 |
K/Q | rs749955874 | 0.203 | 0.062 | N | 0.405 | 0.147 | 0.141422826196 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
K/R | None | None | 0.518 | N | 0.607 | 0.157 | 0.211220785272 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6905 | likely_pathogenic | 0.6476 | pathogenic | 0.006 | Stabilizing | 0.009 | N | 0.475 | neutral | None | None | None | None | I |
K/C | 0.9084 | likely_pathogenic | 0.8979 | pathogenic | -0.33 | Destabilizing | 0.987 | D | 0.761 | deleterious | None | None | None | None | I |
K/D | 0.9022 | likely_pathogenic | 0.8821 | pathogenic | 0.063 | Stabilizing | 0.909 | D | 0.585 | neutral | None | None | None | None | I |
K/E | 0.6153 | likely_pathogenic | 0.5457 | ambiguous | 0.058 | Stabilizing | 0.518 | D | 0.585 | neutral | N | 0.472874224 | None | None | I |
K/F | 0.951 | likely_pathogenic | 0.9424 | pathogenic | -0.285 | Destabilizing | 0.953 | D | 0.749 | deleterious | None | None | None | None | I |
K/G | 0.806 | likely_pathogenic | 0.7795 | pathogenic | -0.156 | Destabilizing | 0.587 | D | 0.563 | neutral | None | None | None | None | I |
K/H | 0.5803 | likely_pathogenic | 0.5358 | ambiguous | -0.351 | Destabilizing | 0.987 | D | 0.604 | neutral | None | None | None | None | I |
K/I | 0.762 | likely_pathogenic | 0.7219 | pathogenic | 0.347 | Stabilizing | 0.883 | D | 0.747 | deleterious | N | 0.475377575 | None | None | I |
K/L | 0.702 | likely_pathogenic | 0.6658 | pathogenic | 0.347 | Stabilizing | 0.587 | D | 0.581 | neutral | None | None | None | None | I |
K/M | 0.6317 | likely_pathogenic | 0.582 | pathogenic | 0.116 | Stabilizing | 0.987 | D | 0.607 | neutral | None | None | None | None | I |
K/N | 0.8372 | likely_pathogenic | 0.7888 | pathogenic | 0.159 | Stabilizing | 0.883 | D | 0.58 | neutral | N | 0.463310026 | None | None | I |
K/P | 0.7992 | likely_pathogenic | 0.795 | pathogenic | 0.26 | Stabilizing | 0.953 | D | 0.599 | neutral | None | None | None | None | I |
K/Q | 0.377 | ambiguous | 0.342 | ambiguous | -0.009 | Destabilizing | 0.062 | N | 0.405 | neutral | N | 0.502853201 | None | None | I |
K/R | 0.0945 | likely_benign | 0.0929 | benign | -0.017 | Destabilizing | 0.518 | D | 0.607 | neutral | N | 0.470242138 | None | None | I |
K/S | 0.8242 | likely_pathogenic | 0.7856 | pathogenic | -0.317 | Destabilizing | 0.587 | D | 0.536 | neutral | None | None | None | None | I |
K/T | 0.6153 | likely_pathogenic | 0.5634 | ambiguous | -0.183 | Destabilizing | 0.682 | D | 0.597 | neutral | N | 0.513627556 | None | None | I |
K/V | 0.6847 | likely_pathogenic | 0.6415 | pathogenic | 0.26 | Stabilizing | 0.833 | D | 0.565 | neutral | None | None | None | None | I |
K/W | 0.9284 | likely_pathogenic | 0.9229 | pathogenic | -0.323 | Destabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | I |
K/Y | 0.8743 | likely_pathogenic | 0.8608 | pathogenic | 0.041 | Stabilizing | 0.984 | D | 0.734 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.