Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27164 | 81715;81716;81717 | chr2:178564642;178564641;178564640 | chr2:179429369;179429368;179429367 |
N2AB | 25523 | 76792;76793;76794 | chr2:178564642;178564641;178564640 | chr2:179429369;179429368;179429367 |
N2A | 24596 | 74011;74012;74013 | chr2:178564642;178564641;178564640 | chr2:179429369;179429368;179429367 |
N2B | 18099 | 54520;54521;54522 | chr2:178564642;178564641;178564640 | chr2:179429369;179429368;179429367 |
Novex-1 | 18224 | 54895;54896;54897 | chr2:178564642;178564641;178564640 | chr2:179429369;179429368;179429367 |
Novex-2 | 18291 | 55096;55097;55098 | chr2:178564642;178564641;178564640 | chr2:179429369;179429368;179429367 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | None | None | None | N | 0.299 | 0.23 | 0.474954162714 | gnomAD-4.0.0 | 1.59187E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78056E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.1793 | likely_benign | 0.1871 | benign | -1.549 | Destabilizing | 0.013 | N | 0.188 | neutral | None | None | None | None | N |
C/D | 0.4868 | ambiguous | 0.4982 | ambiguous | 0.033 | Stabilizing | 0.125 | N | 0.401 | neutral | None | None | None | None | N |
C/E | 0.5927 | likely_pathogenic | 0.6177 | pathogenic | 0.104 | Stabilizing | 0.125 | N | 0.382 | neutral | None | None | None | None | N |
C/F | 0.1495 | likely_benign | 0.1499 | benign | -0.937 | Destabilizing | 0.207 | N | 0.591 | neutral | N | 0.442263316 | None | None | N |
C/G | 0.0757 | likely_benign | 0.0784 | benign | -1.826 | Destabilizing | None | N | 0.257 | neutral | N | 0.420256035 | None | None | N |
C/H | 0.3242 | likely_benign | 0.343 | ambiguous | -1.666 | Destabilizing | 0.711 | D | 0.535 | neutral | None | None | None | None | N |
C/I | 0.2548 | likely_benign | 0.279 | benign | -0.853 | Destabilizing | 0.067 | N | 0.326 | neutral | None | None | None | None | N |
C/K | 0.5269 | ambiguous | 0.5633 | ambiguous | -0.757 | Destabilizing | 0.03 | N | 0.358 | neutral | None | None | None | None | N |
C/L | 0.2443 | likely_benign | 0.2707 | benign | -0.853 | Destabilizing | None | N | 0.111 | neutral | None | None | None | None | N |
C/M | 0.3886 | ambiguous | 0.4332 | ambiguous | -0.069 | Destabilizing | 0.549 | D | 0.454 | neutral | None | None | None | None | N |
C/N | 0.2171 | likely_benign | 0.2294 | benign | -0.641 | Destabilizing | 0.125 | N | 0.399 | neutral | None | None | None | None | N |
C/P | 0.2249 | likely_benign | 0.2476 | benign | -1.059 | Destabilizing | None | N | 0.317 | neutral | None | None | None | None | N |
C/Q | 0.3998 | ambiguous | 0.431 | ambiguous | -0.611 | Destabilizing | 0.257 | N | 0.575 | neutral | None | None | None | None | N |
C/R | 0.2848 | likely_benign | 0.3014 | benign | -0.497 | Destabilizing | None | N | 0.299 | neutral | N | 0.441978101 | None | None | N |
C/S | 0.1314 | likely_benign | 0.1347 | benign | -1.236 | Destabilizing | 0.001 | N | 0.11 | neutral | N | 0.361727806 | None | None | N |
C/T | 0.2331 | likely_benign | 0.2505 | benign | -0.992 | Destabilizing | 0.03 | N | 0.312 | neutral | None | None | None | None | N |
C/V | 0.2289 | likely_benign | 0.2442 | benign | -1.059 | Destabilizing | 0.03 | N | 0.311 | neutral | None | None | None | None | N |
C/W | 0.3956 | ambiguous | 0.406 | ambiguous | -0.87 | Destabilizing | 0.955 | D | 0.488 | neutral | N | 0.482998004 | None | None | N |
C/Y | 0.1712 | likely_benign | 0.1737 | benign | -0.874 | Destabilizing | 0.347 | N | 0.625 | neutral | N | 0.4710875 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.