Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27166 | 81721;81722;81723 | chr2:178564636;178564635;178564634 | chr2:179429363;179429362;179429361 |
N2AB | 25525 | 76798;76799;76800 | chr2:178564636;178564635;178564634 | chr2:179429363;179429362;179429361 |
N2A | 24598 | 74017;74018;74019 | chr2:178564636;178564635;178564634 | chr2:179429363;179429362;179429361 |
N2B | 18101 | 54526;54527;54528 | chr2:178564636;178564635;178564634 | chr2:179429363;179429362;179429361 |
Novex-1 | 18226 | 54901;54902;54903 | chr2:178564636;178564635;178564634 | chr2:179429363;179429362;179429361 |
Novex-2 | 18293 | 55102;55103;55104 | chr2:178564636;178564635;178564634 | chr2:179429363;179429362;179429361 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.546 | N | 0.505 | 0.121 | 0.27132560031 | gnomAD-4.0.0 | 1.36863E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99522E-07 | 1.15942E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2066 | likely_benign | 0.1793 | benign | -1.304 | Destabilizing | 0.004 | N | 0.222 | neutral | N | 0.51564914 | None | None | I |
V/C | 0.7095 | likely_pathogenic | 0.6271 | pathogenic | -0.846 | Destabilizing | 0.011 | N | 0.522 | neutral | None | None | None | None | I |
V/D | 0.71 | likely_pathogenic | 0.633 | pathogenic | -1.039 | Destabilizing | 0.004 | N | 0.598 | neutral | N | 0.513334058 | None | None | I |
V/E | 0.5631 | ambiguous | 0.5313 | ambiguous | -1.06 | Destabilizing | 0.444 | N | 0.646 | neutral | None | None | None | None | I |
V/F | 0.2352 | likely_benign | 0.1855 | benign | -1.014 | Destabilizing | 0.895 | D | 0.619 | neutral | N | 0.466085185 | None | None | I |
V/G | 0.3999 | ambiguous | 0.3569 | ambiguous | -1.596 | Destabilizing | 0.376 | N | 0.727 | deleterious | N | 0.513334058 | None | None | I |
V/H | 0.6937 | likely_pathogenic | 0.6341 | pathogenic | -1.032 | Destabilizing | 0.992 | D | 0.802 | deleterious | None | None | None | None | I |
V/I | 0.0783 | likely_benign | 0.0733 | benign | -0.614 | Destabilizing | 0.546 | D | 0.505 | neutral | N | 0.494484434 | None | None | I |
V/K | 0.5675 | likely_pathogenic | 0.5407 | ambiguous | -1.091 | Destabilizing | 0.848 | D | 0.597 | neutral | None | None | None | None | I |
V/L | 0.2008 | likely_benign | 0.1705 | benign | -0.614 | Destabilizing | 0.199 | N | 0.479 | neutral | N | 0.512723478 | None | None | I |
V/M | 0.1813 | likely_benign | 0.1585 | benign | -0.468 | Destabilizing | 0.972 | D | 0.549 | neutral | None | None | None | None | I |
V/N | 0.4714 | ambiguous | 0.4094 | ambiguous | -0.848 | Destabilizing | 0.737 | D | 0.779 | deleterious | None | None | None | None | I |
V/P | 0.5019 | ambiguous | 0.4495 | ambiguous | -0.808 | Destabilizing | 0.919 | D | 0.684 | prob.delet. | None | None | None | None | I |
V/Q | 0.4805 | ambiguous | 0.4536 | ambiguous | -1.042 | Destabilizing | 0.919 | D | 0.731 | deleterious | None | None | None | None | I |
V/R | 0.4701 | ambiguous | 0.4364 | ambiguous | -0.512 | Destabilizing | 0.919 | D | 0.787 | deleterious | None | None | None | None | I |
V/S | 0.2936 | likely_benign | 0.2465 | benign | -1.354 | Destabilizing | 0.444 | N | 0.669 | prob.neutral | None | None | None | None | I |
V/T | 0.1575 | likely_benign | 0.1462 | benign | -1.266 | Destabilizing | 0.615 | D | 0.415 | neutral | None | None | None | None | I |
V/W | 0.8501 | likely_pathogenic | 0.7859 | pathogenic | -1.162 | Destabilizing | 0.992 | D | 0.795 | deleterious | None | None | None | None | I |
V/Y | 0.6126 | likely_pathogenic | 0.5458 | ambiguous | -0.885 | Destabilizing | 0.972 | D | 0.637 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.