Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27170 | 81733;81734;81735 | chr2:178564624;178564623;178564622 | chr2:179429351;179429350;179429349 |
N2AB | 25529 | 76810;76811;76812 | chr2:178564624;178564623;178564622 | chr2:179429351;179429350;179429349 |
N2A | 24602 | 74029;74030;74031 | chr2:178564624;178564623;178564622 | chr2:179429351;179429350;179429349 |
N2B | 18105 | 54538;54539;54540 | chr2:178564624;178564623;178564622 | chr2:179429351;179429350;179429349 |
Novex-1 | 18230 | 54913;54914;54915 | chr2:178564624;178564623;178564622 | chr2:179429351;179429350;179429349 |
Novex-2 | 18297 | 55114;55115;55116 | chr2:178564624;178564623;178564622 | chr2:179429351;179429350;179429349 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs774553407 | 0.333 | 0.986 | N | 0.657 | 0.482 | 0.663099739152 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
P/L | rs774553407 | 0.333 | 0.986 | N | 0.657 | 0.482 | 0.663099739152 | gnomAD-4.0.0 | 1.59194E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.132 | likely_benign | 0.1194 | benign | -0.234 | Destabilizing | 0.058 | N | 0.372 | neutral | N | 0.515015898 | None | None | N |
P/C | 0.6692 | likely_pathogenic | 0.6528 | pathogenic | -0.39 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
P/D | 0.7594 | likely_pathogenic | 0.7492 | pathogenic | -0.231 | Destabilizing | 0.995 | D | 0.707 | prob.delet. | None | None | None | None | N |
P/E | 0.539 | ambiguous | 0.5316 | ambiguous | -0.367 | Destabilizing | 0.989 | D | 0.693 | prob.delet. | None | None | None | None | N |
P/F | 0.7255 | likely_pathogenic | 0.6979 | pathogenic | -0.659 | Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | N |
P/G | 0.612 | likely_pathogenic | 0.601 | pathogenic | -0.329 | Destabilizing | 0.929 | D | 0.717 | prob.delet. | None | None | None | None | N |
P/H | 0.3785 | ambiguous | 0.3907 | ambiguous | -0.022 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
P/I | 0.4445 | ambiguous | 0.4194 | ambiguous | -0.144 | Destabilizing | 0.989 | D | 0.758 | deleterious | None | None | None | None | N |
P/K | 0.4524 | ambiguous | 0.476 | ambiguous | -0.156 | Destabilizing | 0.989 | D | 0.699 | prob.delet. | None | None | None | None | N |
P/L | 0.2153 | likely_benign | 0.1939 | benign | -0.144 | Destabilizing | 0.986 | D | 0.657 | prob.neutral | N | 0.496151175 | None | None | N |
P/M | 0.5076 | ambiguous | 0.4921 | ambiguous | -0.177 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
P/N | 0.589 | likely_pathogenic | 0.5944 | pathogenic | 0.195 | Stabilizing | 0.995 | D | 0.818 | deleterious | None | None | None | None | N |
P/Q | 0.2958 | likely_benign | 0.3133 | benign | -0.088 | Destabilizing | 0.993 | D | 0.713 | prob.delet. | D | 0.529071683 | None | None | N |
P/R | 0.2877 | likely_benign | 0.2935 | benign | 0.329 | Stabilizing | 0.993 | D | 0.805 | deleterious | N | 0.500799211 | None | None | N |
P/S | 0.2595 | likely_benign | 0.2501 | benign | -0.117 | Destabilizing | 0.972 | D | 0.725 | deleterious | N | 0.484215893 | None | None | N |
P/T | 0.2102 | likely_benign | 0.2054 | benign | -0.158 | Destabilizing | 0.986 | D | 0.662 | prob.neutral | D | 0.528057725 | None | None | N |
P/V | 0.3158 | likely_benign | 0.2975 | benign | -0.14 | Destabilizing | 0.979 | D | 0.679 | prob.neutral | None | None | None | None | N |
P/W | 0.8854 | likely_pathogenic | 0.8749 | pathogenic | -0.735 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
P/Y | 0.7116 | likely_pathogenic | 0.7023 | pathogenic | -0.406 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.