Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27176 | 81751;81752;81753 | chr2:178564606;178564605;178564604 | chr2:179429333;179429332;179429331 |
N2AB | 25535 | 76828;76829;76830 | chr2:178564606;178564605;178564604 | chr2:179429333;179429332;179429331 |
N2A | 24608 | 74047;74048;74049 | chr2:178564606;178564605;178564604 | chr2:179429333;179429332;179429331 |
N2B | 18111 | 54556;54557;54558 | chr2:178564606;178564605;178564604 | chr2:179429333;179429332;179429331 |
Novex-1 | 18236 | 54931;54932;54933 | chr2:178564606;178564605;178564604 | chr2:179429333;179429332;179429331 |
Novex-2 | 18303 | 55132;55133;55134 | chr2:178564606;178564605;178564604 | chr2:179429333;179429332;179429331 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs778385749 | -0.188 | 0.999 | N | 0.407 | 0.334 | 0.567569374525 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 1.78E-05 | 0 |
R/C | rs778385749 | -0.188 | 0.999 | N | 0.407 | 0.334 | 0.567569374525 | gnomAD-4.0.0 | 2.66894E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.23833E-05 | 1.15969E-05 | 3.31422E-05 |
R/G | rs778385749 | None | 0.911 | N | 0.496 | 0.232 | 0.421184727016 | gnomAD-4.0.0 | 2.73738E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59814E-06 | 0 | 0 |
R/H | rs199726308 | -0.674 | 0.994 | N | 0.523 | 0.24 | 0.295974979623 | gnomAD-2.1.1 | 3.58E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.643E-04 | None | 0 | None | 0 | 0 | 1.40885E-04 |
R/H | rs199726308 | -0.674 | 0.994 | N | 0.523 | 0.24 | 0.295974979623 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92976E-04 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
R/H | rs199726308 | -0.674 | 0.994 | N | 0.523 | 0.24 | 0.295974979623 | gnomAD-4.0.0 | 7.43805E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.70271E-05 | None | 0 | 0 | 5.08607E-06 | 3.29431E-05 | 0 |
R/L | rs199726308 | 0.335 | 0.911 | N | 0.475 | 0.209 | None | gnomAD-2.1.1 | 1.18033E-04 | None | None | None | None | N | None | 0 | 8.5E-05 | None | 0 | 0 | None | 0 | None | 0 | 2.34859E-04 | 0 |
R/L | rs199726308 | 0.335 | 0.911 | N | 0.475 | 0.209 | None | gnomAD-3.1.2 | 1.7754E-04 | None | None | None | None | N | None | 2.41E-05 | 2.62158E-04 | 0 | 0 | 0 | None | 0 | 0 | 3.23482E-04 | 0 | 0 |
R/L | rs199726308 | 0.335 | 0.911 | N | 0.475 | 0.209 | None | gnomAD-4.0.0 | 1.62397E-04 | None | None | None | None | N | None | 1.33561E-05 | 1.3344E-04 | None | 0 | 0 | None | 6.25313E-05 | 0 | 2.11072E-04 | 0 | 0 |
R/S | None | -0.105 | 0.679 | N | 0.47 | 0.203 | 0.264081493735 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
R/S | None | -0.105 | 0.679 | N | 0.47 | 0.203 | 0.264081493735 | gnomAD-4.0.0 | 6.84347E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.5264E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2739 | likely_benign | 0.2576 | benign | -0.632 | Destabilizing | 0.688 | D | 0.478 | neutral | None | None | None | None | N |
R/C | 0.1183 | likely_benign | 0.1195 | benign | -0.576 | Destabilizing | 0.999 | D | 0.407 | neutral | N | 0.467280635 | None | None | N |
R/D | 0.6278 | likely_pathogenic | 0.6032 | pathogenic | -0.152 | Destabilizing | 0.842 | D | 0.5 | neutral | None | None | None | None | N |
R/E | 0.2925 | likely_benign | 0.2658 | benign | -0.097 | Destabilizing | 0.525 | D | 0.454 | neutral | None | None | None | None | N |
R/F | 0.4038 | ambiguous | 0.3809 | ambiguous | -0.898 | Destabilizing | 0.991 | D | 0.427 | neutral | None | None | None | None | N |
R/G | 0.269 | likely_benign | 0.2385 | benign | -0.835 | Destabilizing | 0.911 | D | 0.496 | neutral | N | 0.458969138 | None | None | N |
R/H | 0.1009 | likely_benign | 0.1008 | benign | -1.196 | Destabilizing | 0.994 | D | 0.523 | neutral | N | 0.466520166 | None | None | N |
R/I | 0.1691 | likely_benign | 0.1513 | benign | -0.119 | Destabilizing | 0.949 | D | 0.436 | neutral | None | None | None | None | N |
R/K | 0.0732 | likely_benign | 0.0717 | benign | -0.601 | Destabilizing | 0.525 | D | 0.473 | neutral | None | None | None | None | N |
R/L | 0.1827 | likely_benign | 0.1676 | benign | -0.119 | Destabilizing | 0.911 | D | 0.475 | neutral | N | 0.519326951 | None | None | N |
R/M | 0.1772 | likely_benign | 0.1655 | benign | -0.22 | Destabilizing | 0.991 | D | 0.482 | neutral | None | None | None | None | N |
R/N | 0.4144 | ambiguous | 0.3978 | ambiguous | -0.067 | Destabilizing | 0.842 | D | 0.467 | neutral | None | None | None | None | N |
R/P | 0.3764 | ambiguous | 0.3839 | ambiguous | -0.271 | Destabilizing | 0.986 | D | 0.454 | neutral | N | 0.445522625 | None | None | N |
R/Q | 0.0861 | likely_benign | 0.0841 | benign | -0.367 | Destabilizing | 0.067 | N | 0.281 | neutral | None | None | None | None | N |
R/S | 0.3529 | ambiguous | 0.3283 | benign | -0.727 | Destabilizing | 0.679 | D | 0.47 | neutral | N | 0.458278492 | None | None | N |
R/T | 0.1344 | likely_benign | 0.1287 | benign | -0.535 | Destabilizing | 0.029 | N | 0.225 | neutral | None | None | None | None | N |
R/V | 0.2311 | likely_benign | 0.2157 | benign | -0.271 | Destabilizing | 0.842 | D | 0.493 | neutral | None | None | None | None | N |
R/W | 0.2109 | likely_benign | 0.1931 | benign | -0.729 | Destabilizing | 0.998 | D | 0.445 | neutral | None | None | None | None | N |
R/Y | 0.2935 | likely_benign | 0.2906 | benign | -0.364 | Destabilizing | 0.991 | D | 0.459 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.