Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27178 | 81757;81758;81759 | chr2:178564600;178564599;178564598 | chr2:179429327;179429326;179429325 |
N2AB | 25537 | 76834;76835;76836 | chr2:178564600;178564599;178564598 | chr2:179429327;179429326;179429325 |
N2A | 24610 | 74053;74054;74055 | chr2:178564600;178564599;178564598 | chr2:179429327;179429326;179429325 |
N2B | 18113 | 54562;54563;54564 | chr2:178564600;178564599;178564598 | chr2:179429327;179429326;179429325 |
Novex-1 | 18238 | 54937;54938;54939 | chr2:178564600;178564599;178564598 | chr2:179429327;179429326;179429325 |
Novex-2 | 18305 | 55138;55139;55140 | chr2:178564600;178564599;178564598 | chr2:179429327;179429326;179429325 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs397517721 | None | 0.977 | N | 0.615 | 0.33 | 0.318540980066 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 1.31027E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs397517721 | None | 0.977 | N | 0.615 | 0.33 | 0.318540980066 | gnomAD-4.0.0 | 1.31518E-05 | None | None | None | None | N | None | 0 | 1.31027E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3344 | likely_benign | 0.2893 | benign | -0.582 | Destabilizing | 0.977 | D | 0.709 | prob.delet. | N | 0.483623689 | None | None | N |
E/C | 0.922 | likely_pathogenic | 0.9034 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
E/D | 0.2022 | likely_benign | 0.1758 | benign | -0.675 | Destabilizing | 0.117 | N | 0.237 | neutral | N | 0.483877179 | None | None | N |
E/F | 0.8614 | likely_pathogenic | 0.8165 | pathogenic | -0.125 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
E/G | 0.5135 | ambiguous | 0.453 | ambiguous | -0.877 | Destabilizing | 0.993 | D | 0.747 | deleterious | N | 0.497715473 | None | None | N |
E/H | 0.659 | likely_pathogenic | 0.5994 | pathogenic | -0.135 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/I | 0.3917 | ambiguous | 0.3481 | ambiguous | 0.197 | Stabilizing | 0.998 | D | 0.829 | deleterious | None | None | None | None | N |
E/K | 0.2794 | likely_benign | 0.242 | benign | -0.068 | Destabilizing | 0.977 | D | 0.615 | neutral | N | 0.509800603 | None | None | N |
E/L | 0.5725 | likely_pathogenic | 0.5137 | ambiguous | 0.197 | Stabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
E/M | 0.602 | likely_pathogenic | 0.5457 | ambiguous | 0.363 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
E/N | 0.4436 | ambiguous | 0.3752 | ambiguous | -0.547 | Destabilizing | 0.99 | D | 0.76 | deleterious | None | None | None | None | N |
E/P | 0.9787 | likely_pathogenic | 0.9703 | pathogenic | -0.041 | Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
E/Q | 0.2249 | likely_benign | 0.2085 | benign | -0.455 | Destabilizing | 0.997 | D | 0.709 | prob.delet. | D | 0.522423184 | None | None | N |
E/R | 0.4499 | ambiguous | 0.397 | ambiguous | 0.222 | Stabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
E/S | 0.3783 | ambiguous | 0.3272 | benign | -0.754 | Destabilizing | 0.983 | D | 0.66 | neutral | None | None | None | None | N |
E/T | 0.3409 | ambiguous | 0.2978 | benign | -0.511 | Destabilizing | 0.995 | D | 0.809 | deleterious | None | None | None | None | N |
E/V | 0.2367 | likely_benign | 0.2052 | benign | -0.041 | Destabilizing | 0.997 | D | 0.814 | deleterious | D | 0.522924616 | None | None | N |
E/W | 0.9595 | likely_pathogenic | 0.944 | pathogenic | 0.121 | Stabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
E/Y | 0.8009 | likely_pathogenic | 0.7411 | pathogenic | 0.135 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.