Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2717881757;81758;81759 chr2:178564600;178564599;178564598chr2:179429327;179429326;179429325
N2AB2553776834;76835;76836 chr2:178564600;178564599;178564598chr2:179429327;179429326;179429325
N2A2461074053;74054;74055 chr2:178564600;178564599;178564598chr2:179429327;179429326;179429325
N2B1811354562;54563;54564 chr2:178564600;178564599;178564598chr2:179429327;179429326;179429325
Novex-11823854937;54938;54939 chr2:178564600;178564599;178564598chr2:179429327;179429326;179429325
Novex-21830555138;55139;55140 chr2:178564600;178564599;178564598chr2:179429327;179429326;179429325
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAA
  • RefSeq wild type template codon: CTT
  • Domain: Fn3-86
  • Domain position: 9
  • Structural Position: 11
  • Q(SASA): 0.6884
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/K rs397517721 None 0.977 N 0.615 0.33 0.318540980066 gnomAD-3.1.2 1.32E-05 None None None None N None 0 1.31027E-04 0 0 0 None 0 0 0 0 0
E/K rs397517721 None 0.977 N 0.615 0.33 0.318540980066 gnomAD-4.0.0 1.31518E-05 None None None None N None 0 1.31027E-04 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.3344 likely_benign 0.2893 benign -0.582 Destabilizing 0.977 D 0.709 prob.delet. N 0.483623689 None None N
E/C 0.922 likely_pathogenic 0.9034 pathogenic -0.277 Destabilizing 1.0 D 0.831 deleterious None None None None N
E/D 0.2022 likely_benign 0.1758 benign -0.675 Destabilizing 0.117 N 0.237 neutral N 0.483877179 None None N
E/F 0.8614 likely_pathogenic 0.8165 pathogenic -0.125 Destabilizing 1.0 D 0.821 deleterious None None None None N
E/G 0.5135 ambiguous 0.453 ambiguous -0.877 Destabilizing 0.993 D 0.747 deleterious N 0.497715473 None None N
E/H 0.659 likely_pathogenic 0.5994 pathogenic -0.135 Destabilizing 1.0 D 0.721 prob.delet. None None None None N
E/I 0.3917 ambiguous 0.3481 ambiguous 0.197 Stabilizing 0.998 D 0.829 deleterious None None None None N
E/K 0.2794 likely_benign 0.242 benign -0.068 Destabilizing 0.977 D 0.615 neutral N 0.509800603 None None N
E/L 0.5725 likely_pathogenic 0.5137 ambiguous 0.197 Stabilizing 0.998 D 0.823 deleterious None None None None N
E/M 0.602 likely_pathogenic 0.5457 ambiguous 0.363 Stabilizing 1.0 D 0.819 deleterious None None None None N
E/N 0.4436 ambiguous 0.3752 ambiguous -0.547 Destabilizing 0.99 D 0.76 deleterious None None None None N
E/P 0.9787 likely_pathogenic 0.9703 pathogenic -0.041 Destabilizing 0.998 D 0.833 deleterious None None None None N
E/Q 0.2249 likely_benign 0.2085 benign -0.455 Destabilizing 0.997 D 0.709 prob.delet. D 0.522423184 None None N
E/R 0.4499 ambiguous 0.397 ambiguous 0.222 Stabilizing 0.998 D 0.755 deleterious None None None None N
E/S 0.3783 ambiguous 0.3272 benign -0.754 Destabilizing 0.983 D 0.66 neutral None None None None N
E/T 0.3409 ambiguous 0.2978 benign -0.511 Destabilizing 0.995 D 0.809 deleterious None None None None N
E/V 0.2367 likely_benign 0.2052 benign -0.041 Destabilizing 0.997 D 0.814 deleterious D 0.522924616 None None N
E/W 0.9595 likely_pathogenic 0.944 pathogenic 0.121 Stabilizing 1.0 D 0.836 deleterious None None None None N
E/Y 0.8009 likely_pathogenic 0.7411 pathogenic 0.135 Stabilizing 1.0 D 0.817 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.