Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27183 | 81772;81773;81774 | chr2:178564585;178564584;178564583 | chr2:179429312;179429311;179429310 |
N2AB | 25542 | 76849;76850;76851 | chr2:178564585;178564584;178564583 | chr2:179429312;179429311;179429310 |
N2A | 24615 | 74068;74069;74070 | chr2:178564585;178564584;178564583 | chr2:179429312;179429311;179429310 |
N2B | 18118 | 54577;54578;54579 | chr2:178564585;178564584;178564583 | chr2:179429312;179429311;179429310 |
Novex-1 | 18243 | 54952;54953;54954 | chr2:178564585;178564584;178564583 | chr2:179429312;179429311;179429310 |
Novex-2 | 18310 | 55153;55154;55155 | chr2:178564585;178564584;178564583 | chr2:179429312;179429311;179429310 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1559331817 | None | 0.994 | D | 0.761 | 0.477 | 0.684252380218 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
T/I | rs1559331817 | None | 0.994 | D | 0.761 | 0.477 | 0.684252380218 | gnomAD-4.0.0 | 1.59203E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85901E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2895 | likely_benign | 0.2548 | benign | -0.761 | Destabilizing | 0.825 | D | 0.461 | neutral | N | 0.48499695 | None | None | I |
T/C | 0.6924 | likely_pathogenic | 0.6669 | pathogenic | -0.796 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
T/D | 0.6474 | likely_pathogenic | 0.6324 | pathogenic | -1.511 | Destabilizing | 0.991 | D | 0.678 | prob.neutral | None | None | None | None | I |
T/E | 0.7458 | likely_pathogenic | 0.7085 | pathogenic | -1.453 | Destabilizing | 0.991 | D | 0.683 | prob.neutral | None | None | None | None | I |
T/F | 0.7297 | likely_pathogenic | 0.6922 | pathogenic | -0.792 | Destabilizing | 0.995 | D | 0.774 | deleterious | None | None | None | None | I |
T/G | 0.3041 | likely_benign | 0.3034 | benign | -1.058 | Destabilizing | 0.938 | D | 0.595 | neutral | None | None | None | None | I |
T/H | 0.5065 | ambiguous | 0.4832 | ambiguous | -1.432 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
T/I | 0.8449 | likely_pathogenic | 0.8012 | pathogenic | -0.047 | Destabilizing | 0.994 | D | 0.761 | deleterious | D | 0.525106254 | None | None | I |
T/K | 0.4874 | ambiguous | 0.4348 | ambiguous | -0.922 | Destabilizing | 0.988 | D | 0.685 | prob.neutral | D | 0.525218347 | None | None | I |
T/L | 0.3809 | ambiguous | 0.3311 | benign | -0.047 | Destabilizing | 0.968 | D | 0.59 | neutral | None | None | None | None | I |
T/M | 0.2686 | likely_benign | 0.2325 | benign | 0.225 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
T/N | 0.2008 | likely_benign | 0.1904 | benign | -1.25 | Destabilizing | 0.991 | D | 0.679 | prob.neutral | None | None | None | None | I |
T/P | 0.8452 | likely_pathogenic | 0.8204 | pathogenic | -0.253 | Destabilizing | 0.994 | D | 0.757 | deleterious | D | 0.543210509 | None | None | I |
T/Q | 0.4724 | ambiguous | 0.4374 | ambiguous | -1.38 | Destabilizing | 0.991 | D | 0.745 | deleterious | None | None | None | None | I |
T/R | 0.4823 | ambiguous | 0.417 | ambiguous | -0.741 | Destabilizing | 0.988 | D | 0.747 | deleterious | N | 0.483248977 | None | None | I |
T/S | 0.1325 | likely_benign | 0.124 | benign | -1.333 | Destabilizing | 0.234 | N | 0.346 | neutral | N | 0.496124804 | None | None | I |
T/V | 0.6949 | likely_pathogenic | 0.6444 | pathogenic | -0.253 | Destabilizing | 0.968 | D | 0.539 | neutral | None | None | None | None | I |
T/W | 0.9123 | likely_pathogenic | 0.8957 | pathogenic | -0.866 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
T/Y | 0.7072 | likely_pathogenic | 0.671 | pathogenic | -0.537 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.