Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27185 | 81778;81779;81780 | chr2:178564579;178564578;178564577 | chr2:179429306;179429305;179429304 |
N2AB | 25544 | 76855;76856;76857 | chr2:178564579;178564578;178564577 | chr2:179429306;179429305;179429304 |
N2A | 24617 | 74074;74075;74076 | chr2:178564579;178564578;178564577 | chr2:179429306;179429305;179429304 |
N2B | 18120 | 54583;54584;54585 | chr2:178564579;178564578;178564577 | chr2:179429306;179429305;179429304 |
Novex-1 | 18245 | 54958;54959;54960 | chr2:178564579;178564578;178564577 | chr2:179429306;179429305;179429304 |
Novex-2 | 18312 | 55159;55160;55161 | chr2:178564579;178564578;178564577 | chr2:179429306;179429305;179429304 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.22 | N | 0.467 | 0.128 | 0.126345400529 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
N/I | rs756828159 | 0.037 | 0.497 | N | 0.623 | 0.323 | 0.559044820595 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/I | rs756828159 | 0.037 | 0.497 | N | 0.623 | 0.323 | 0.559044820595 | gnomAD-4.0.0 | 1.59206E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43308E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3407 | ambiguous | 0.3564 | ambiguous | -0.681 | Destabilizing | 0.157 | N | 0.458 | neutral | None | None | None | None | N |
N/C | 0.3211 | likely_benign | 0.3418 | ambiguous | 0.168 | Stabilizing | 0.968 | D | 0.643 | neutral | None | None | None | None | N |
N/D | 0.1829 | likely_benign | 0.1771 | benign | -0.617 | Destabilizing | 0.22 | N | 0.467 | neutral | N | 0.462396233 | None | None | N |
N/E | 0.4743 | ambiguous | 0.4577 | ambiguous | -0.626 | Destabilizing | 0.157 | N | 0.46 | neutral | None | None | None | None | N |
N/F | 0.6665 | likely_pathogenic | 0.6537 | pathogenic | -0.989 | Destabilizing | 0.567 | D | 0.627 | neutral | None | None | None | None | N |
N/G | 0.3021 | likely_benign | 0.3122 | benign | -0.885 | Destabilizing | 0.272 | N | 0.419 | neutral | None | None | None | None | N |
N/H | 0.1121 | likely_benign | 0.1026 | benign | -0.93 | Destabilizing | 0.002 | N | 0.348 | neutral | N | 0.510632897 | None | None | N |
N/I | 0.5251 | ambiguous | 0.52 | ambiguous | -0.214 | Destabilizing | 0.497 | N | 0.623 | neutral | N | 0.502959393 | None | None | N |
N/K | 0.4095 | ambiguous | 0.3909 | ambiguous | -0.041 | Destabilizing | 0.22 | N | 0.473 | neutral | N | 0.512537051 | None | None | N |
N/L | 0.4464 | ambiguous | 0.4439 | ambiguous | -0.214 | Destabilizing | 0.396 | N | 0.557 | neutral | None | None | None | None | N |
N/M | 0.4568 | ambiguous | 0.4606 | ambiguous | 0.497 | Stabilizing | 0.968 | D | 0.568 | neutral | None | None | None | None | N |
N/P | 0.929 | likely_pathogenic | 0.9242 | pathogenic | -0.344 | Destabilizing | 0.726 | D | 0.587 | neutral | None | None | None | None | N |
N/Q | 0.35 | ambiguous | 0.3424 | ambiguous | -0.789 | Destabilizing | 0.567 | D | 0.481 | neutral | None | None | None | None | N |
N/R | 0.4567 | ambiguous | 0.4408 | ambiguous | 0.123 | Stabilizing | 0.567 | D | 0.471 | neutral | None | None | None | None | N |
N/S | 0.091 | likely_benign | 0.0953 | benign | -0.446 | Destabilizing | 0.124 | N | 0.44 | neutral | N | 0.432804044 | None | None | N |
N/T | 0.1514 | likely_benign | 0.1551 | benign | -0.306 | Destabilizing | 0.004 | N | 0.266 | neutral | N | 0.456350121 | None | None | N |
N/V | 0.4906 | ambiguous | 0.5 | ambiguous | -0.344 | Destabilizing | 0.396 | N | 0.574 | neutral | None | None | None | None | N |
N/W | 0.7894 | likely_pathogenic | 0.7867 | pathogenic | -0.84 | Destabilizing | 0.968 | D | 0.635 | neutral | None | None | None | None | N |
N/Y | 0.2294 | likely_benign | 0.2215 | benign | -0.591 | Destabilizing | 0.331 | N | 0.575 | neutral | N | 0.509542759 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.