Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27187 | 81784;81785;81786 | chr2:178564573;178564572;178564571 | chr2:179429300;179429299;179429298 |
N2AB | 25546 | 76861;76862;76863 | chr2:178564573;178564572;178564571 | chr2:179429300;179429299;179429298 |
N2A | 24619 | 74080;74081;74082 | chr2:178564573;178564572;178564571 | chr2:179429300;179429299;179429298 |
N2B | 18122 | 54589;54590;54591 | chr2:178564573;178564572;178564571 | chr2:179429300;179429299;179429298 |
Novex-1 | 18247 | 54964;54965;54966 | chr2:178564573;178564572;178564571 | chr2:179429300;179429299;179429298 |
Novex-2 | 18314 | 55165;55166;55167 | chr2:178564573;178564572;178564571 | chr2:179429300;179429299;179429298 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs764117771 | -1.615 | 0.864 | D | 0.821 | 0.418 | 0.746452135184 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
V/F | rs764117771 | -1.615 | 0.864 | D | 0.821 | 0.418 | 0.746452135184 | gnomAD-4.0.0 | 4.79063E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7343E-04 | 4.49771E-06 | 0 | 1.65722E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7384 | likely_pathogenic | 0.7084 | pathogenic | -2.243 | Highly Destabilizing | 0.645 | D | 0.561 | neutral | N | 0.506515156 | None | None | N |
V/C | 0.901 | likely_pathogenic | 0.8952 | pathogenic | -2.201 | Highly Destabilizing | 0.995 | D | 0.793 | deleterious | None | None | None | None | N |
V/D | 0.9974 | likely_pathogenic | 0.9961 | pathogenic | -2.952 | Highly Destabilizing | 0.928 | D | 0.843 | deleterious | D | 0.550452211 | None | None | N |
V/E | 0.9914 | likely_pathogenic | 0.9885 | pathogenic | -2.648 | Highly Destabilizing | 0.981 | D | 0.823 | deleterious | None | None | None | None | N |
V/F | 0.7858 | likely_pathogenic | 0.7415 | pathogenic | -1.346 | Destabilizing | 0.864 | D | 0.821 | deleterious | D | 0.531080508 | None | None | N |
V/G | 0.9367 | likely_pathogenic | 0.9237 | pathogenic | -2.85 | Highly Destabilizing | 0.928 | D | 0.831 | deleterious | D | 0.527486111 | None | None | N |
V/H | 0.9966 | likely_pathogenic | 0.9954 | pathogenic | -2.721 | Highly Destabilizing | 0.995 | D | 0.847 | deleterious | None | None | None | None | N |
V/I | 0.0728 | likely_benign | 0.0714 | benign | -0.494 | Destabilizing | 0.006 | N | 0.195 | neutral | N | 0.480189772 | None | None | N |
V/K | 0.9925 | likely_pathogenic | 0.9906 | pathogenic | -1.71 | Destabilizing | 0.945 | D | 0.823 | deleterious | None | None | None | None | N |
V/L | 0.504 | ambiguous | 0.4769 | ambiguous | -0.494 | Destabilizing | 0.114 | N | 0.485 | neutral | N | 0.470746447 | None | None | N |
V/M | 0.4943 | ambiguous | 0.4569 | ambiguous | -0.992 | Destabilizing | 0.894 | D | 0.735 | prob.delet. | None | None | None | None | N |
V/N | 0.9903 | likely_pathogenic | 0.9855 | pathogenic | -2.332 | Highly Destabilizing | 0.981 | D | 0.867 | deleterious | None | None | None | None | N |
V/P | 0.9964 | likely_pathogenic | 0.9947 | pathogenic | -1.056 | Destabilizing | 0.981 | D | 0.841 | deleterious | None | None | None | None | N |
V/Q | 0.9877 | likely_pathogenic | 0.9843 | pathogenic | -2.002 | Highly Destabilizing | 0.981 | D | 0.851 | deleterious | None | None | None | None | N |
V/R | 0.9857 | likely_pathogenic | 0.9825 | pathogenic | -1.83 | Destabilizing | 0.945 | D | 0.867 | deleterious | None | None | None | None | N |
V/S | 0.9526 | likely_pathogenic | 0.9369 | pathogenic | -2.952 | Highly Destabilizing | 0.945 | D | 0.813 | deleterious | None | None | None | None | N |
V/T | 0.8632 | likely_pathogenic | 0.8282 | pathogenic | -2.475 | Highly Destabilizing | 0.707 | D | 0.631 | neutral | None | None | None | None | N |
V/W | 0.9956 | likely_pathogenic | 0.9942 | pathogenic | -1.815 | Destabilizing | 0.995 | D | 0.821 | deleterious | None | None | None | None | N |
V/Y | 0.9777 | likely_pathogenic | 0.9715 | pathogenic | -1.483 | Destabilizing | 0.945 | D | 0.825 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.