Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27188 | 81787;81788;81789 | chr2:178564570;178564569;178564568 | chr2:179429297;179429296;179429295 |
N2AB | 25547 | 76864;76865;76866 | chr2:178564570;178564569;178564568 | chr2:179429297;179429296;179429295 |
N2A | 24620 | 74083;74084;74085 | chr2:178564570;178564569;178564568 | chr2:179429297;179429296;179429295 |
N2B | 18123 | 54592;54593;54594 | chr2:178564570;178564569;178564568 | chr2:179429297;179429296;179429295 |
Novex-1 | 18248 | 54967;54968;54969 | chr2:178564570;178564569;178564568 | chr2:179429297;179429296;179429295 |
Novex-2 | 18315 | 55168;55169;55170 | chr2:178564570;178564569;178564568 | chr2:179429297;179429296;179429295 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.949 | N | 0.72 | 0.312 | 0.399596177874 | gnomAD-4.0.0 | 1.36877E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79911E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.154 | likely_benign | 0.135 | benign | -1.017 | Destabilizing | 0.349 | N | 0.557 | neutral | N | 0.516750792 | None | None | N |
T/C | 0.4614 | ambiguous | 0.4541 | ambiguous | -0.895 | Destabilizing | 0.996 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/D | 0.6321 | likely_pathogenic | 0.5491 | ambiguous | -1.318 | Destabilizing | 0.633 | D | 0.655 | neutral | None | None | None | None | N |
T/E | 0.5178 | ambiguous | 0.4694 | ambiguous | -1.205 | Destabilizing | 0.775 | D | 0.665 | neutral | None | None | None | None | N |
T/F | 0.3471 | ambiguous | 0.3062 | benign | -0.708 | Destabilizing | 0.961 | D | 0.763 | deleterious | None | None | None | None | N |
T/G | 0.4919 | ambiguous | 0.4369 | ambiguous | -1.371 | Destabilizing | 0.633 | D | 0.667 | neutral | None | None | None | None | N |
T/H | 0.3045 | likely_benign | 0.2872 | benign | -1.555 | Destabilizing | 0.989 | D | 0.757 | deleterious | None | None | None | None | N |
T/I | 0.2027 | likely_benign | 0.1964 | benign | -0.122 | Destabilizing | 0.949 | D | 0.72 | prob.delet. | N | 0.47390368 | None | None | N |
T/K | 0.2927 | likely_benign | 0.2799 | benign | -0.911 | Destabilizing | 0.565 | D | 0.662 | neutral | N | 0.519617739 | None | None | N |
T/L | 0.157 | likely_benign | 0.1438 | benign | -0.122 | Destabilizing | 0.775 | D | 0.663 | neutral | None | None | None | None | N |
T/M | 0.1164 | likely_benign | 0.1082 | benign | -0.061 | Destabilizing | 0.996 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/N | 0.225 | likely_benign | 0.1899 | benign | -1.27 | Destabilizing | 0.011 | N | 0.289 | neutral | None | None | None | None | N |
T/P | 0.8266 | likely_pathogenic | 0.7562 | pathogenic | -0.388 | Destabilizing | 0.949 | D | 0.718 | prob.delet. | N | 0.519684523 | None | None | N |
T/Q | 0.3066 | likely_benign | 0.2882 | benign | -1.253 | Destabilizing | 0.923 | D | 0.724 | prob.delet. | None | None | None | None | N |
T/R | 0.2704 | likely_benign | 0.2508 | benign | -0.851 | Destabilizing | 0.901 | D | 0.693 | prob.neutral | N | 0.481207834 | None | None | N |
T/S | 0.1503 | likely_benign | 0.1264 | benign | -1.465 | Destabilizing | 0.034 | N | 0.411 | neutral | N | 0.477923045 | None | None | N |
T/V | 0.1687 | likely_benign | 0.1717 | benign | -0.388 | Destabilizing | 0.775 | D | 0.585 | neutral | None | None | None | None | N |
T/W | 0.6852 | likely_pathogenic | 0.6683 | pathogenic | -0.773 | Destabilizing | 0.996 | D | 0.733 | prob.delet. | None | None | None | None | N |
T/Y | 0.3564 | ambiguous | 0.3334 | benign | -0.47 | Destabilizing | 0.987 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.