Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27197 | 81814;81815;81816 | chr2:178564543;178564542;178564541 | chr2:179429270;179429269;179429268 |
N2AB | 25556 | 76891;76892;76893 | chr2:178564543;178564542;178564541 | chr2:179429270;179429269;179429268 |
N2A | 24629 | 74110;74111;74112 | chr2:178564543;178564542;178564541 | chr2:179429270;179429269;179429268 |
N2B | 18132 | 54619;54620;54621 | chr2:178564543;178564542;178564541 | chr2:179429270;179429269;179429268 |
Novex-1 | 18257 | 54994;54995;54996 | chr2:178564543;178564542;178564541 | chr2:179429270;179429269;179429268 |
Novex-2 | 18324 | 55195;55196;55197 | chr2:178564543;178564542;178564541 | chr2:179429270;179429269;179429268 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1704957831 | None | 1.0 | N | 0.722 | 0.459 | 0.412587454835 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs1704957831 | None | 1.0 | N | 0.722 | 0.459 | 0.412587454835 | gnomAD-4.0.0 | 2.0299E-06 | None | None | None | None | I | None | 1.74727E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.69704E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.9017 | likely_pathogenic | 0.8454 | pathogenic | -0.604 | Destabilizing | 1.0 | D | 0.757 | deleterious | N | 0.50013501 | None | None | I |
D/C | 0.9727 | likely_pathogenic | 0.9614 | pathogenic | -0.215 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
D/E | 0.8828 | likely_pathogenic | 0.8427 | pathogenic | -0.746 | Destabilizing | 1.0 | D | 0.443 | neutral | N | 0.499121052 | None | None | I |
D/F | 0.9892 | likely_pathogenic | 0.9823 | pathogenic | -0.609 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
D/G | 0.8841 | likely_pathogenic | 0.8256 | pathogenic | -0.918 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | D | 0.525191478 | None | None | I |
D/H | 0.9383 | likely_pathogenic | 0.9077 | pathogenic | -1.04 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | D | 0.52443101 | None | None | I |
D/I | 0.973 | likely_pathogenic | 0.9596 | pathogenic | 0.215 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
D/K | 0.982 | likely_pathogenic | 0.9722 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
D/L | 0.9654 | likely_pathogenic | 0.9538 | pathogenic | 0.215 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
D/M | 0.988 | likely_pathogenic | 0.9813 | pathogenic | 0.766 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
D/N | 0.2873 | likely_benign | 0.2636 | benign | -0.771 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | N | 0.484753006 | None | None | I |
D/P | 0.9862 | likely_pathogenic | 0.98 | pathogenic | -0.034 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
D/Q | 0.9662 | likely_pathogenic | 0.947 | pathogenic | -0.655 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
D/R | 0.9762 | likely_pathogenic | 0.9635 | pathogenic | -0.471 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
D/S | 0.5676 | likely_pathogenic | 0.477 | ambiguous | -1.026 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
D/T | 0.7474 | likely_pathogenic | 0.663 | pathogenic | -0.768 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
D/V | 0.9269 | likely_pathogenic | 0.8913 | pathogenic | -0.034 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.51553024 | None | None | I |
D/W | 0.9973 | likely_pathogenic | 0.9959 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
D/Y | 0.9199 | likely_pathogenic | 0.8864 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | D | 0.554652039 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.