Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27208 | 81847;81848;81849 | chr2:178564510;178564509;178564508 | chr2:179429237;179429236;179429235 |
N2AB | 25567 | 76924;76925;76926 | chr2:178564510;178564509;178564508 | chr2:179429237;179429236;179429235 |
N2A | 24640 | 74143;74144;74145 | chr2:178564510;178564509;178564508 | chr2:179429237;179429236;179429235 |
N2B | 18143 | 54652;54653;54654 | chr2:178564510;178564509;178564508 | chr2:179429237;179429236;179429235 |
Novex-1 | 18268 | 55027;55028;55029 | chr2:178564510;178564509;178564508 | chr2:179429237;179429236;179429235 |
Novex-2 | 18335 | 55228;55229;55230 | chr2:178564510;178564509;178564508 | chr2:179429237;179429236;179429235 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | N | 0.657 | 0.349 | 0.353548585375 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
E/K | None | None | 0.999 | D | 0.68 | 0.446 | 0.461845970543 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.9665 | likely_pathogenic | 0.9508 | pathogenic | -1.797 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | D | 0.545395647 | None | None | N |
E/C | 0.9925 | likely_pathogenic | 0.9919 | pathogenic | -0.989 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/D | 0.9802 | likely_pathogenic | 0.9772 | pathogenic | -1.894 | Destabilizing | 0.999 | D | 0.657 | neutral | N | 0.502198925 | None | None | N |
E/F | 0.9967 | likely_pathogenic | 0.9958 | pathogenic | -1.483 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/G | 0.9809 | likely_pathogenic | 0.9741 | pathogenic | -2.174 | Highly Destabilizing | 1.0 | D | 0.744 | deleterious | D | 0.547170074 | None | None | N |
E/H | 0.9935 | likely_pathogenic | 0.9913 | pathogenic | -1.356 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/I | 0.9877 | likely_pathogenic | 0.9829 | pathogenic | -0.704 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
E/K | 0.9763 | likely_pathogenic | 0.9672 | pathogenic | -1.844 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | D | 0.53738025 | None | None | N |
E/L | 0.9843 | likely_pathogenic | 0.9788 | pathogenic | -0.704 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/M | 0.9829 | likely_pathogenic | 0.9748 | pathogenic | 0.05 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/N | 0.9958 | likely_pathogenic | 0.9942 | pathogenic | -2.033 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/P | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -1.056 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
E/Q | 0.8365 | likely_pathogenic | 0.7844 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.759 | deleterious | N | 0.478116734 | None | None | N |
E/R | 0.9834 | likely_pathogenic | 0.9787 | pathogenic | -1.628 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
E/S | 0.9808 | likely_pathogenic | 0.9719 | pathogenic | -2.663 | Highly Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
E/T | 0.9891 | likely_pathogenic | 0.9835 | pathogenic | -2.303 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/V | 0.9727 | likely_pathogenic | 0.9603 | pathogenic | -1.056 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.53479981 | None | None | N |
E/W | 0.9982 | likely_pathogenic | 0.9982 | pathogenic | -1.571 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/Y | 0.9941 | likely_pathogenic | 0.9929 | pathogenic | -1.326 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.