Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27209 | 81850;81851;81852 | chr2:178564507;178564506;178564505 | chr2:179429234;179429233;179429232 |
N2AB | 25568 | 76927;76928;76929 | chr2:178564507;178564506;178564505 | chr2:179429234;179429233;179429232 |
N2A | 24641 | 74146;74147;74148 | chr2:178564507;178564506;178564505 | chr2:179429234;179429233;179429232 |
N2B | 18144 | 54655;54656;54657 | chr2:178564507;178564506;178564505 | chr2:179429234;179429233;179429232 |
Novex-1 | 18269 | 55030;55031;55032 | chr2:178564507;178564506;178564505 | chr2:179429234;179429233;179429232 |
Novex-2 | 18336 | 55231;55232;55233 | chr2:178564507;178564506;178564505 | chr2:179429234;179429233;179429232 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.549 | N | 0.603 | 0.374 | 0.249502417897 | gnomAD-4.0.0 | 6.84885E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00001E-07 | 0 | 0 |
K/R | None | None | 0.002 | N | 0.269 | 0.092 | 0.215109475489 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9602 | likely_pathogenic | 0.9295 | pathogenic | -1.459 | Destabilizing | 0.25 | N | 0.559 | neutral | None | None | None | None | N |
K/C | 0.8934 | likely_pathogenic | 0.8294 | pathogenic | -1.51 | Destabilizing | 0.992 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/D | 0.9961 | likely_pathogenic | 0.9937 | pathogenic | -2.247 | Highly Destabilizing | 0.92 | D | 0.625 | neutral | None | None | None | None | N |
K/E | 0.9077 | likely_pathogenic | 0.8413 | pathogenic | -1.918 | Destabilizing | 0.549 | D | 0.621 | neutral | N | 0.506109264 | None | None | N |
K/F | 0.9783 | likely_pathogenic | 0.9502 | pathogenic | -0.662 | Destabilizing | 0.85 | D | 0.722 | prob.delet. | None | None | None | None | N |
K/G | 0.9694 | likely_pathogenic | 0.9484 | pathogenic | -1.963 | Destabilizing | 0.617 | D | 0.631 | neutral | None | None | None | None | N |
K/H | 0.8093 | likely_pathogenic | 0.7194 | pathogenic | -1.776 | Destabilizing | 0.92 | D | 0.649 | neutral | None | None | None | None | N |
K/I | 0.9127 | likely_pathogenic | 0.8455 | pathogenic | -0.011 | Destabilizing | 0.739 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/L | 0.8695 | likely_pathogenic | 0.7833 | pathogenic | -0.011 | Destabilizing | 0.103 | N | 0.619 | neutral | None | None | None | None | N |
K/M | 0.6683 | likely_pathogenic | 0.5047 | ambiguous | -0.382 | Destabilizing | 0.036 | N | 0.492 | neutral | N | 0.517249438 | None | None | N |
K/N | 0.9789 | likely_pathogenic | 0.961 | pathogenic | -2.061 | Highly Destabilizing | 0.549 | D | 0.603 | neutral | N | 0.501336324 | None | None | N |
K/P | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -0.476 | Destabilizing | 0.972 | D | 0.642 | neutral | None | None | None | None | N |
K/Q | 0.5225 | ambiguous | 0.3944 | ambiguous | -1.621 | Destabilizing | 0.549 | D | 0.632 | neutral | N | 0.484713326 | None | None | N |
K/R | 0.1102 | likely_benign | 0.0999 | benign | -1.044 | Destabilizing | 0.002 | N | 0.269 | neutral | N | 0.432420042 | None | None | N |
K/S | 0.9707 | likely_pathogenic | 0.9441 | pathogenic | -2.532 | Highly Destabilizing | 0.617 | D | 0.613 | neutral | None | None | None | None | N |
K/T | 0.8983 | likely_pathogenic | 0.8242 | pathogenic | -1.936 | Destabilizing | 0.549 | D | 0.579 | neutral | N | 0.477356266 | None | None | N |
K/V | 0.8717 | likely_pathogenic | 0.7904 | pathogenic | -0.476 | Destabilizing | 0.447 | N | 0.627 | neutral | None | None | None | None | N |
K/W | 0.9601 | likely_pathogenic | 0.92 | pathogenic | -0.78 | Destabilizing | 0.992 | D | 0.746 | deleterious | None | None | None | None | N |
K/Y | 0.9039 | likely_pathogenic | 0.8211 | pathogenic | -0.423 | Destabilizing | 0.92 | D | 0.694 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.