Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27210 | 81853;81854;81855 | chr2:178564504;178564503;178564502 | chr2:179429231;179429230;179429229 |
N2AB | 25569 | 76930;76931;76932 | chr2:178564504;178564503;178564502 | chr2:179429231;179429230;179429229 |
N2A | 24642 | 74149;74150;74151 | chr2:178564504;178564503;178564502 | chr2:179429231;179429230;179429229 |
N2B | 18145 | 54658;54659;54660 | chr2:178564504;178564503;178564502 | chr2:179429231;179429230;179429229 |
Novex-1 | 18270 | 55033;55034;55035 | chr2:178564504;178564503;178564502 | chr2:179429231;179429230;179429229 |
Novex-2 | 18337 | 55234;55235;55236 | chr2:178564504;178564503;178564502 | chr2:179429231;179429230;179429229 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.892 | N | 0.431 | 0.236 | 0.28492961333 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
K/T | rs1241055435 | -1.256 | 0.967 | N | 0.708 | 0.409 | 0.349429436713 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 0 | 2.93E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/T | rs1241055435 | -1.256 | 0.967 | N | 0.708 | 0.409 | 0.349429436713 | gnomAD-4.0.0 | 1.59473E-06 | None | None | None | None | N | None | 0 | 2.29674E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9195 | likely_pathogenic | 0.8878 | pathogenic | -1.37 | Destabilizing | 0.916 | D | 0.525 | neutral | None | None | None | None | N |
K/C | 0.8107 | likely_pathogenic | 0.7727 | pathogenic | -1.445 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
K/D | 0.9916 | likely_pathogenic | 0.988 | pathogenic | -1.447 | Destabilizing | 0.987 | D | 0.779 | deleterious | None | None | None | None | N |
K/E | 0.8395 | likely_pathogenic | 0.7797 | pathogenic | -1.2 | Destabilizing | 0.892 | D | 0.431 | neutral | N | 0.466190998 | None | None | N |
K/F | 0.9831 | likely_pathogenic | 0.9745 | pathogenic | -0.724 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
K/G | 0.9568 | likely_pathogenic | 0.9384 | pathogenic | -1.812 | Destabilizing | 0.975 | D | 0.716 | prob.delet. | None | None | None | None | N |
K/H | 0.7447 | likely_pathogenic | 0.6908 | pathogenic | -1.945 | Destabilizing | 0.997 | D | 0.785 | deleterious | None | None | None | None | N |
K/I | 0.9177 | likely_pathogenic | 0.8799 | pathogenic | -0.14 | Destabilizing | 0.983 | D | 0.845 | deleterious | N | 0.502452414 | None | None | N |
K/L | 0.7695 | likely_pathogenic | 0.7376 | pathogenic | -0.14 | Destabilizing | 0.975 | D | 0.716 | prob.delet. | None | None | None | None | N |
K/M | 0.6349 | likely_pathogenic | 0.57 | pathogenic | -0.474 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
K/N | 0.9558 | likely_pathogenic | 0.9378 | pathogenic | -1.499 | Destabilizing | 0.967 | D | 0.612 | neutral | N | 0.483031486 | None | None | N |
K/P | 0.9987 | likely_pathogenic | 0.9981 | pathogenic | -0.527 | Destabilizing | 0.996 | D | 0.803 | deleterious | None | None | None | None | N |
K/Q | 0.4371 | ambiguous | 0.366 | ambiguous | -1.291 | Destabilizing | 0.967 | D | 0.591 | neutral | N | 0.467316633 | None | None | N |
K/R | 0.0736 | likely_benign | 0.0697 | benign | -1.019 | Destabilizing | 0.025 | N | 0.19 | neutral | N | 0.410177901 | None | None | N |
K/S | 0.9687 | likely_pathogenic | 0.9543 | pathogenic | -2.084 | Highly Destabilizing | 0.916 | D | 0.495 | neutral | None | None | None | None | N |
K/T | 0.8915 | likely_pathogenic | 0.8457 | pathogenic | -1.6 | Destabilizing | 0.967 | D | 0.708 | prob.delet. | N | 0.48886761 | None | None | N |
K/V | 0.8855 | likely_pathogenic | 0.8391 | pathogenic | -0.527 | Destabilizing | 0.987 | D | 0.804 | deleterious | None | None | None | None | N |
K/W | 0.9693 | likely_pathogenic | 0.9541 | pathogenic | -0.724 | Destabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | N |
K/Y | 0.9375 | likely_pathogenic | 0.9168 | pathogenic | -0.372 | Destabilizing | 0.996 | D | 0.836 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.