Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2722 | 8389;8390;8391 | chr2:178770628;178770627;178770626 | chr2:179635355;179635354;179635353 |
N2AB | 2722 | 8389;8390;8391 | chr2:178770628;178770627;178770626 | chr2:179635355;179635354;179635353 |
N2A | 2722 | 8389;8390;8391 | chr2:178770628;178770627;178770626 | chr2:179635355;179635354;179635353 |
N2B | 2676 | 8251;8252;8253 | chr2:178770628;178770627;178770626 | chr2:179635355;179635354;179635353 |
Novex-1 | 2676 | 8251;8252;8253 | chr2:178770628;178770627;178770626 | chr2:179635355;179635354;179635353 |
Novex-2 | 2676 | 8251;8252;8253 | chr2:178770628;178770627;178770626 | chr2:179635355;179635354;179635353 |
Novex-3 | 2722 | 8389;8390;8391 | chr2:178770628;178770627;178770626 | chr2:179635355;179635354;179635353 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.997 | D | 0.446 | 0.688 | 0.450733807028 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
Q/P | None | None | 0.999 | D | 0.587 | 0.849 | 0.714752477654 | gnomAD-4.0.0 | 6.84147E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99297E-07 | 0 | 0 |
Q/R | rs752069599 | 0.282 | 0.997 | D | 0.495 | 0.81 | 0.460438652622 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.8E-05 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3028 | likely_benign | 0.3658 | ambiguous | -0.307 | Destabilizing | 0.997 | D | 0.443 | neutral | None | None | None | None | N |
Q/C | 0.8182 | likely_pathogenic | 0.865 | pathogenic | 0.371 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
Q/D | 0.441 | ambiguous | 0.4785 | ambiguous | -0.485 | Destabilizing | 0.997 | D | 0.499 | neutral | None | None | None | None | N |
Q/E | 0.0848 | likely_benign | 0.0877 | benign | -0.501 | Destabilizing | 0.992 | D | 0.403 | neutral | N | 0.519390386 | None | None | N |
Q/F | 0.8845 | likely_pathogenic | 0.9114 | pathogenic | -0.497 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | None | None | None | None | N |
Q/G | 0.3378 | likely_benign | 0.4122 | ambiguous | -0.534 | Destabilizing | 0.997 | D | 0.498 | neutral | None | None | None | None | N |
Q/H | 0.3452 | ambiguous | 0.3876 | ambiguous | -0.676 | Destabilizing | 0.999 | D | 0.557 | neutral | D | 0.6217464 | None | None | N |
Q/I | 0.6979 | likely_pathogenic | 0.7752 | pathogenic | 0.217 | Stabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
Q/K | 0.1228 | likely_benign | 0.1485 | benign | -0.014 | Destabilizing | 0.997 | D | 0.446 | neutral | D | 0.547989389 | None | None | N |
Q/L | 0.2761 | likely_benign | 0.3415 | ambiguous | 0.217 | Stabilizing | 0.997 | D | 0.498 | neutral | D | 0.659518378 | None | None | N |
Q/M | 0.4859 | ambiguous | 0.5397 | ambiguous | 0.819 | Stabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | N |
Q/N | 0.3673 | ambiguous | 0.406 | ambiguous | -0.322 | Destabilizing | 0.999 | D | 0.536 | neutral | None | None | None | None | N |
Q/P | 0.8848 | likely_pathogenic | 0.9231 | pathogenic | 0.072 | Stabilizing | 0.999 | D | 0.587 | neutral | D | 0.660154253 | None | None | N |
Q/R | 0.1589 | likely_benign | 0.1797 | benign | 0.136 | Stabilizing | 0.997 | D | 0.495 | neutral | D | 0.660824421 | None | None | N |
Q/S | 0.3592 | ambiguous | 0.4142 | ambiguous | -0.313 | Destabilizing | 0.997 | D | 0.457 | neutral | None | None | None | None | N |
Q/T | 0.3187 | likely_benign | 0.3911 | ambiguous | -0.172 | Destabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | N |
Q/V | 0.4876 | ambiguous | 0.5622 | ambiguous | 0.072 | Stabilizing | 0.999 | D | 0.544 | neutral | None | None | None | None | N |
Q/W | 0.8156 | likely_pathogenic | 0.835 | pathogenic | -0.458 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
Q/Y | 0.7116 | likely_pathogenic | 0.757 | pathogenic | -0.192 | Destabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.