Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27220 | 81883;81884;81885 | chr2:178564474;178564473;178564472 | chr2:179429201;179429200;179429199 |
N2AB | 25579 | 76960;76961;76962 | chr2:178564474;178564473;178564472 | chr2:179429201;179429200;179429199 |
N2A | 24652 | 74179;74180;74181 | chr2:178564474;178564473;178564472 | chr2:179429201;179429200;179429199 |
N2B | 18155 | 54688;54689;54690 | chr2:178564474;178564473;178564472 | chr2:179429201;179429200;179429199 |
Novex-1 | 18280 | 55063;55064;55065 | chr2:178564474;178564473;178564472 | chr2:179429201;179429200;179429199 |
Novex-2 | 18347 | 55264;55265;55266 | chr2:178564474;178564473;178564472 | chr2:179429201;179429200;179429199 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1356967920 | None | 1.0 | N | 0.63 | 0.435 | 0.506373324096 | gnomAD-4.0.0 | 6.85005E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65865E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5966 | likely_pathogenic | 0.6108 | pathogenic | -0.182 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
A/D | 0.9772 | likely_pathogenic | 0.9633 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.501652266 | None | None | I |
A/E | 0.9634 | likely_pathogenic | 0.9442 | pathogenic | -0.276 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
A/F | 0.9192 | likely_pathogenic | 0.8815 | pathogenic | -0.206 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
A/G | 0.427 | ambiguous | 0.3779 | ambiguous | -0.696 | Destabilizing | 1.0 | D | 0.585 | neutral | N | 0.493449512 | None | None | I |
A/H | 0.978 | likely_pathogenic | 0.9709 | pathogenic | -1.081 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
A/I | 0.7533 | likely_pathogenic | 0.6868 | pathogenic | 0.73 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
A/K | 0.9927 | likely_pathogenic | 0.9889 | pathogenic | -0.325 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
A/L | 0.7352 | likely_pathogenic | 0.6914 | pathogenic | 0.73 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
A/M | 0.7408 | likely_pathogenic | 0.6897 | pathogenic | 0.517 | Stabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | I |
A/N | 0.9215 | likely_pathogenic | 0.8966 | pathogenic | -0.394 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
A/P | 0.9849 | likely_pathogenic | 0.9803 | pathogenic | 0.437 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.506767601 | None | None | I |
A/Q | 0.956 | likely_pathogenic | 0.9445 | pathogenic | -0.232 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | I |
A/R | 0.9851 | likely_pathogenic | 0.9788 | pathogenic | -0.527 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
A/S | 0.2506 | likely_benign | 0.2244 | benign | -0.878 | Destabilizing | 1.0 | D | 0.578 | neutral | N | 0.484357705 | None | None | I |
A/T | 0.3263 | likely_benign | 0.295 | benign | -0.609 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.482534053 | None | None | I |
A/V | 0.3541 | ambiguous | 0.3066 | benign | 0.437 | Stabilizing | 1.0 | D | 0.63 | neutral | N | 0.475901461 | None | None | I |
A/W | 0.9936 | likely_pathogenic | 0.9905 | pathogenic | -0.851 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
A/Y | 0.959 | likely_pathogenic | 0.943 | pathogenic | -0.201 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.