Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27232 | 81919;81920;81921 | chr2:178564438;178564437;178564436 | chr2:179429165;179429164;179429163 |
N2AB | 25591 | 76996;76997;76998 | chr2:178564438;178564437;178564436 | chr2:179429165;179429164;179429163 |
N2A | 24664 | 74215;74216;74217 | chr2:178564438;178564437;178564436 | chr2:179429165;179429164;179429163 |
N2B | 18167 | 54724;54725;54726 | chr2:178564438;178564437;178564436 | chr2:179429165;179429164;179429163 |
Novex-1 | 18292 | 55099;55100;55101 | chr2:178564438;178564437;178564436 | chr2:179429165;179429164;179429163 |
Novex-2 | 18359 | 55300;55301;55302 | chr2:178564438;178564437;178564436 | chr2:179429165;179429164;179429163 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.978 | N | 0.679 | 0.406 | 0.608695890411 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
V/M | rs2154162679 | None | 0.994 | D | 0.693 | 0.374 | 0.605774515499 | gnomAD-4.0.0 | 1.59378E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86193E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4875 | ambiguous | 0.3253 | benign | -1.629 | Destabilizing | 0.978 | D | 0.679 | prob.neutral | N | 0.474213757 | None | None | N |
V/C | 0.9044 | likely_pathogenic | 0.8615 | pathogenic | -1.337 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/D | 0.9939 | likely_pathogenic | 0.9845 | pathogenic | -1.873 | Destabilizing | 0.999 | D | 0.836 | deleterious | None | None | None | None | N |
V/E | 0.9811 | likely_pathogenic | 0.9631 | pathogenic | -1.606 | Destabilizing | 0.999 | D | 0.801 | deleterious | D | 0.555949621 | None | None | N |
V/F | 0.8355 | likely_pathogenic | 0.7368 | pathogenic | -0.95 | Destabilizing | 0.995 | D | 0.748 | deleterious | None | None | None | None | N |
V/G | 0.9254 | likely_pathogenic | 0.8424 | pathogenic | -2.216 | Highly Destabilizing | 0.999 | D | 0.838 | deleterious | D | 0.555949621 | None | None | N |
V/H | 0.9937 | likely_pathogenic | 0.9865 | pathogenic | -2.128 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
V/I | 0.1028 | likely_benign | 0.0967 | benign | 0.018 | Stabilizing | 0.437 | N | 0.197 | neutral | None | None | None | None | N |
V/K | 0.9907 | likely_pathogenic | 0.9821 | pathogenic | -1.164 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
V/L | 0.6333 | likely_pathogenic | 0.5285 | ambiguous | 0.018 | Stabilizing | 0.121 | N | 0.327 | neutral | N | 0.472467967 | None | None | N |
V/M | 0.6427 | likely_pathogenic | 0.5173 | ambiguous | -0.224 | Destabilizing | 0.994 | D | 0.693 | prob.neutral | D | 0.525817497 | None | None | N |
V/N | 0.9782 | likely_pathogenic | 0.9461 | pathogenic | -1.593 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
V/P | 0.9867 | likely_pathogenic | 0.9731 | pathogenic | -0.503 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
V/Q | 0.9798 | likely_pathogenic | 0.9607 | pathogenic | -1.298 | Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
V/R | 0.9834 | likely_pathogenic | 0.9697 | pathogenic | -1.331 | Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
V/S | 0.8693 | likely_pathogenic | 0.7241 | pathogenic | -2.284 | Highly Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
V/T | 0.7452 | likely_pathogenic | 0.5386 | ambiguous | -1.838 | Destabilizing | 0.992 | D | 0.668 | neutral | None | None | None | None | N |
V/W | 0.9976 | likely_pathogenic | 0.9951 | pathogenic | -1.438 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
V/Y | 0.9834 | likely_pathogenic | 0.9692 | pathogenic | -0.981 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.