Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27245 | 81958;81959;81960 | chr2:178564399;178564398;178564397 | chr2:179429126;179429125;179429124 |
N2AB | 25604 | 77035;77036;77037 | chr2:178564399;178564398;178564397 | chr2:179429126;179429125;179429124 |
N2A | 24677 | 74254;74255;74256 | chr2:178564399;178564398;178564397 | chr2:179429126;179429125;179429124 |
N2B | 18180 | 54763;54764;54765 | chr2:178564399;178564398;178564397 | chr2:179429126;179429125;179429124 |
Novex-1 | 18305 | 55138;55139;55140 | chr2:178564399;178564398;178564397 | chr2:179429126;179429125;179429124 |
Novex-2 | 18372 | 55339;55340;55341 | chr2:178564399;178564398;178564397 | chr2:179429126;179429125;179429124 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs777316227 | -0.81 | 0.997 | N | 0.696 | 0.507 | 0.7647777765 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
V/L | rs777316227 | -0.81 | 0.997 | N | 0.696 | 0.507 | 0.7647777765 | gnomAD-4.0.0 | 1.02648E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.34925E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8374 | likely_pathogenic | 0.8138 | pathogenic | -2.62 | Highly Destabilizing | 0.999 | D | 0.673 | neutral | D | 0.557581549 | None | None | N |
V/C | 0.9578 | likely_pathogenic | 0.956 | pathogenic | -2.021 | Highly Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
V/D | 0.999 | likely_pathogenic | 0.9988 | pathogenic | -3.336 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
V/E | 0.9966 | likely_pathogenic | 0.9961 | pathogenic | -3.036 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.652700131 | None | None | N |
V/F | 0.9698 | likely_pathogenic | 0.9463 | pathogenic | -1.297 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/G | 0.9609 | likely_pathogenic | 0.9544 | pathogenic | -3.172 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.652700131 | None | None | N |
V/H | 0.9994 | likely_pathogenic | 0.9991 | pathogenic | -2.878 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/I | 0.1145 | likely_benign | 0.0916 | benign | -0.997 | Destabilizing | 0.997 | D | 0.648 | neutral | N | 0.520191821 | None | None | N |
V/K | 0.9984 | likely_pathogenic | 0.9981 | pathogenic | -1.954 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
V/L | 0.841 | likely_pathogenic | 0.7558 | pathogenic | -0.997 | Destabilizing | 0.997 | D | 0.696 | prob.neutral | N | 0.521102642 | None | None | N |
V/M | 0.8855 | likely_pathogenic | 0.8189 | pathogenic | -1.387 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
V/N | 0.9944 | likely_pathogenic | 0.9931 | pathogenic | -2.569 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/P | 0.9976 | likely_pathogenic | 0.9973 | pathogenic | -1.524 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
V/Q | 0.9968 | likely_pathogenic | 0.9961 | pathogenic | -2.223 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
V/R | 0.9962 | likely_pathogenic | 0.9957 | pathogenic | -2.001 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
V/S | 0.9663 | likely_pathogenic | 0.9598 | pathogenic | -3.048 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
V/T | 0.9326 | likely_pathogenic | 0.9239 | pathogenic | -2.61 | Highly Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/W | 0.9996 | likely_pathogenic | 0.9993 | pathogenic | -1.789 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
V/Y | 0.9973 | likely_pathogenic | 0.9962 | pathogenic | -1.611 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.