Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27248 | 81967;81968;81969 | chr2:178564390;178564389;178564388 | chr2:179429117;179429116;179429115 |
N2AB | 25607 | 77044;77045;77046 | chr2:178564390;178564389;178564388 | chr2:179429117;179429116;179429115 |
N2A | 24680 | 74263;74264;74265 | chr2:178564390;178564389;178564388 | chr2:179429117;179429116;179429115 |
N2B | 18183 | 54772;54773;54774 | chr2:178564390;178564389;178564388 | chr2:179429117;179429116;179429115 |
Novex-1 | 18308 | 55147;55148;55149 | chr2:178564390;178564389;178564388 | chr2:179429117;179429116;179429115 |
Novex-2 | 18375 | 55348;55349;55350 | chr2:178564390;178564389;178564388 | chr2:179429117;179429116;179429115 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | None | None | 0.991 | N | 0.769 | 0.42 | 0.461323234107 | gnomAD-4.0.0 | 7.95872E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.42921E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9182 | likely_pathogenic | 0.8847 | pathogenic | -1.678 | Destabilizing | 0.953 | D | 0.571 | neutral | None | None | None | None | N |
R/C | 0.436 | ambiguous | 0.3713 | ambiguous | -1.793 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
R/D | 0.9912 | likely_pathogenic | 0.9885 | pathogenic | -0.796 | Destabilizing | 0.986 | D | 0.727 | prob.delet. | None | None | None | None | N |
R/E | 0.8565 | likely_pathogenic | 0.8087 | pathogenic | -0.676 | Destabilizing | 0.91 | D | 0.477 | neutral | None | None | None | None | N |
R/F | 0.9069 | likely_pathogenic | 0.8729 | pathogenic | -1.718 | Destabilizing | 0.998 | D | 0.762 | deleterious | None | None | None | None | N |
R/G | 0.8926 | likely_pathogenic | 0.854 | pathogenic | -1.954 | Destabilizing | 0.939 | D | 0.651 | neutral | N | 0.478334225 | None | None | N |
R/H | 0.3286 | likely_benign | 0.2804 | benign | -1.995 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | N |
R/I | 0.672 | likely_pathogenic | 0.5953 | pathogenic | -0.921 | Destabilizing | 0.991 | D | 0.769 | deleterious | N | 0.464916463 | None | None | N |
R/K | 0.1038 | likely_benign | 0.0932 | benign | -1.611 | Destabilizing | 0.046 | N | 0.235 | neutral | N | 0.404908154 | None | None | N |
R/L | 0.69 | likely_pathogenic | 0.6258 | pathogenic | -0.921 | Destabilizing | 0.953 | D | 0.651 | neutral | None | None | None | None | N |
R/M | 0.7113 | likely_pathogenic | 0.6312 | pathogenic | -1.024 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | N |
R/N | 0.9683 | likely_pathogenic | 0.9574 | pathogenic | -1.109 | Destabilizing | 0.986 | D | 0.594 | neutral | None | None | None | None | N |
R/P | 0.9944 | likely_pathogenic | 0.9934 | pathogenic | -1.158 | Destabilizing | 0.993 | D | 0.728 | prob.delet. | None | None | None | None | N |
R/Q | 0.2469 | likely_benign | 0.2096 | benign | -1.384 | Destabilizing | 0.986 | D | 0.583 | neutral | None | None | None | None | N |
R/S | 0.9545 | likely_pathogenic | 0.9346 | pathogenic | -2.054 | Highly Destabilizing | 0.939 | D | 0.624 | neutral | N | 0.5112089 | None | None | N |
R/T | 0.8098 | likely_pathogenic | 0.7536 | pathogenic | -1.756 | Destabilizing | 0.982 | D | 0.725 | prob.delet. | N | 0.487601321 | None | None | N |
R/V | 0.7249 | likely_pathogenic | 0.657 | pathogenic | -1.158 | Destabilizing | 0.993 | D | 0.749 | deleterious | None | None | None | None | N |
R/W | 0.5327 | ambiguous | 0.4644 | ambiguous | -1.265 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
R/Y | 0.8075 | likely_pathogenic | 0.7608 | pathogenic | -0.98 | Destabilizing | 0.998 | D | 0.748 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.