Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27251 | 81976;81977;81978 | chr2:178564381;178564380;178564379 | chr2:179429108;179429107;179429106 |
N2AB | 25610 | 77053;77054;77055 | chr2:178564381;178564380;178564379 | chr2:179429108;179429107;179429106 |
N2A | 24683 | 74272;74273;74274 | chr2:178564381;178564380;178564379 | chr2:179429108;179429107;179429106 |
N2B | 18186 | 54781;54782;54783 | chr2:178564381;178564380;178564379 | chr2:179429108;179429107;179429106 |
Novex-1 | 18311 | 55156;55157;55158 | chr2:178564381;178564380;178564379 | chr2:179429108;179429107;179429106 |
Novex-2 | 18378 | 55357;55358;55359 | chr2:178564381;178564380;178564379 | chr2:179429108;179429107;179429106 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.958 | N | 0.741 | 0.394 | 0.448099371145 | gnomAD-4.0.0 | 1.59162E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85835E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7353 | likely_pathogenic | 0.7069 | pathogenic | -0.697 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
A/D | 0.9361 | likely_pathogenic | 0.9263 | pathogenic | -0.483 | Destabilizing | 0.998 | D | 0.835 | deleterious | N | 0.503235655 | None | None | I |
A/E | 0.904 | likely_pathogenic | 0.8894 | pathogenic | -0.647 | Destabilizing | 0.995 | D | 0.786 | deleterious | None | None | None | None | I |
A/F | 0.7034 | likely_pathogenic | 0.6498 | pathogenic | -0.923 | Destabilizing | 0.991 | D | 0.863 | deleterious | None | None | None | None | I |
A/G | 0.4377 | ambiguous | 0.4158 | ambiguous | -0.155 | Destabilizing | 0.979 | D | 0.643 | neutral | N | 0.501968207 | None | None | I |
A/H | 0.9189 | likely_pathogenic | 0.9071 | pathogenic | -0.175 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
A/I | 0.56 | ambiguous | 0.4692 | ambiguous | -0.352 | Destabilizing | 0.938 | D | 0.71 | prob.delet. | None | None | None | None | I |
A/K | 0.958 | likely_pathogenic | 0.9525 | pathogenic | -0.327 | Destabilizing | 0.995 | D | 0.786 | deleterious | None | None | None | None | I |
A/L | 0.4564 | ambiguous | 0.4059 | ambiguous | -0.352 | Destabilizing | 0.938 | D | 0.573 | neutral | None | None | None | None | I |
A/M | 0.5702 | likely_pathogenic | 0.5028 | ambiguous | -0.3 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | I |
A/N | 0.8211 | likely_pathogenic | 0.7909 | pathogenic | -0.093 | Destabilizing | 0.998 | D | 0.859 | deleterious | None | None | None | None | I |
A/P | 0.9628 | likely_pathogenic | 0.9665 | pathogenic | -0.259 | Destabilizing | 0.998 | D | 0.791 | deleterious | D | 0.536939404 | None | None | I |
A/Q | 0.8397 | likely_pathogenic | 0.8319 | pathogenic | -0.408 | Destabilizing | 0.998 | D | 0.805 | deleterious | None | None | None | None | I |
A/R | 0.8825 | likely_pathogenic | 0.8792 | pathogenic | 0.127 | Stabilizing | 0.995 | D | 0.805 | deleterious | None | None | None | None | I |
A/S | 0.1978 | likely_benign | 0.1802 | benign | -0.254 | Destabilizing | 0.979 | D | 0.636 | neutral | N | 0.48753771 | None | None | I |
A/T | 0.3535 | ambiguous | 0.2969 | benign | -0.348 | Destabilizing | 0.958 | D | 0.741 | deleterious | N | 0.503996123 | None | None | I |
A/V | 0.2894 | likely_benign | 0.2341 | benign | -0.259 | Destabilizing | 0.142 | N | 0.454 | neutral | N | 0.477845688 | None | None | I |
A/W | 0.9675 | likely_pathogenic | 0.9612 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
A/Y | 0.893 | likely_pathogenic | 0.8752 | pathogenic | -0.666 | Destabilizing | 0.995 | D | 0.864 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.