Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27256 | 81991;81992;81993 | chr2:178564366;178564365;178564364 | chr2:179429093;179429092;179429091 |
N2AB | 25615 | 77068;77069;77070 | chr2:178564366;178564365;178564364 | chr2:179429093;179429092;179429091 |
N2A | 24688 | 74287;74288;74289 | chr2:178564366;178564365;178564364 | chr2:179429093;179429092;179429091 |
N2B | 18191 | 54796;54797;54798 | chr2:178564366;178564365;178564364 | chr2:179429093;179429092;179429091 |
Novex-1 | 18316 | 55171;55172;55173 | chr2:178564366;178564365;178564364 | chr2:179429093;179429092;179429091 |
Novex-2 | 18383 | 55372;55373;55374 | chr2:178564366;178564365;178564364 | chr2:179429093;179429092;179429091 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs748963818 | -0.812 | 0.521 | N | 0.554 | 0.207 | 0.376393476264 | gnomAD-2.1.1 | 4.43E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.59477E-04 | None | 0 | 0 | 0 |
E/G | rs748963818 | -0.812 | 0.521 | N | 0.554 | 0.207 | 0.376393476264 | gnomAD-4.0.0 | 1.09481E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99484E-07 | 1.73897E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.104 | likely_benign | 0.0989 | benign | -0.41 | Destabilizing | 0.472 | N | 0.517 | neutral | N | 0.496874166 | None | None | N |
E/C | 0.7203 | likely_pathogenic | 0.7131 | pathogenic | -0.17 | Destabilizing | 0.996 | D | 0.564 | neutral | None | None | None | None | N |
E/D | 0.1124 | likely_benign | 0.1095 | benign | -0.35 | Destabilizing | 0.309 | N | 0.498 | neutral | N | 0.449621723 | None | None | N |
E/F | 0.5757 | likely_pathogenic | 0.5606 | ambiguous | -0.158 | Destabilizing | 0.953 | D | 0.577 | neutral | None | None | None | None | N |
E/G | 0.1439 | likely_benign | 0.1397 | benign | -0.621 | Destabilizing | 0.521 | D | 0.554 | neutral | N | 0.480243101 | None | None | N |
E/H | 0.3793 | ambiguous | 0.3691 | ambiguous | 0.152 | Stabilizing | 0.02 | N | 0.237 | neutral | None | None | None | None | N |
E/I | 0.1917 | likely_benign | 0.1972 | benign | 0.115 | Stabilizing | 0.59 | D | 0.644 | neutral | None | None | None | None | N |
E/K | 0.0906 | likely_benign | 0.089 | benign | 0.259 | Stabilizing | 0.309 | N | 0.499 | neutral | N | 0.487619964 | None | None | N |
E/L | 0.198 | likely_benign | 0.1932 | benign | 0.115 | Stabilizing | 0.59 | D | 0.562 | neutral | None | None | None | None | N |
E/M | 0.2789 | likely_benign | 0.276 | benign | 0.152 | Stabilizing | 0.953 | D | 0.565 | neutral | None | None | None | None | N |
E/N | 0.1877 | likely_benign | 0.1848 | benign | -0.156 | Destabilizing | 0.009 | N | 0.181 | neutral | None | None | None | None | N |
E/P | 0.2818 | likely_benign | 0.2718 | benign | -0.04 | Destabilizing | 0.984 | D | 0.645 | neutral | None | None | None | None | N |
E/Q | 0.1077 | likely_benign | 0.1075 | benign | -0.095 | Destabilizing | 0.684 | D | 0.565 | neutral | N | 0.521020462 | None | None | N |
E/R | 0.1851 | likely_benign | 0.1846 | benign | 0.539 | Stabilizing | 0.004 | N | 0.129 | neutral | None | None | None | None | N |
E/S | 0.149 | likely_benign | 0.1481 | benign | -0.314 | Destabilizing | 0.59 | D | 0.481 | neutral | None | None | None | None | N |
E/T | 0.1731 | likely_benign | 0.171 | benign | -0.135 | Destabilizing | 0.742 | D | 0.581 | neutral | None | None | None | None | N |
E/V | 0.1224 | likely_benign | 0.1251 | benign | -0.04 | Destabilizing | 0.028 | N | 0.4 | neutral | N | 0.505725722 | None | None | N |
E/W | 0.8587 | likely_pathogenic | 0.847 | pathogenic | 0.033 | Stabilizing | 0.996 | D | 0.61 | neutral | None | None | None | None | N |
E/Y | 0.4502 | ambiguous | 0.4427 | ambiguous | 0.093 | Stabilizing | 0.91 | D | 0.595 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.