Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27257 | 81994;81995;81996 | chr2:178564363;178564362;178564361 | chr2:179429090;179429089;179429088 |
N2AB | 25616 | 77071;77072;77073 | chr2:178564363;178564362;178564361 | chr2:179429090;179429089;179429088 |
N2A | 24689 | 74290;74291;74292 | chr2:178564363;178564362;178564361 | chr2:179429090;179429089;179429088 |
N2B | 18192 | 54799;54800;54801 | chr2:178564363;178564362;178564361 | chr2:179429090;179429089;179429088 |
Novex-1 | 18317 | 55174;55175;55176 | chr2:178564363;178564362;178564361 | chr2:179429090;179429089;179429088 |
Novex-2 | 18384 | 55375;55376;55377 | chr2:178564363;178564362;178564361 | chr2:179429090;179429089;179429088 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | D | 0.829 | 0.451 | 0.763603987931 | gnomAD-4.0.0 | 1.59149E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85835E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1565 | likely_benign | 0.1406 | benign | -1.344 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | N | 0.483988857 | None | None | N |
P/C | 0.8474 | likely_pathogenic | 0.8246 | pathogenic | -0.915 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
P/D | 0.9686 | likely_pathogenic | 0.9613 | pathogenic | -0.976 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
P/E | 0.8923 | likely_pathogenic | 0.8664 | pathogenic | -1.038 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
P/F | 0.8497 | likely_pathogenic | 0.8005 | pathogenic | -1.228 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
P/G | 0.6828 | likely_pathogenic | 0.6348 | pathogenic | -1.582 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
P/H | 0.7653 | likely_pathogenic | 0.7067 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
P/I | 0.8015 | likely_pathogenic | 0.7758 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
P/K | 0.8895 | likely_pathogenic | 0.8625 | pathogenic | -1.014 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
P/L | 0.5985 | likely_pathogenic | 0.5415 | ambiguous | -0.821 | Destabilizing | 1.0 | D | 0.829 | deleterious | D | 0.534275923 | None | None | N |
P/M | 0.8145 | likely_pathogenic | 0.7798 | pathogenic | -0.592 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
P/N | 0.9307 | likely_pathogenic | 0.9119 | pathogenic | -0.731 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
P/Q | 0.7772 | likely_pathogenic | 0.731 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.529302401 | None | None | N |
P/R | 0.8276 | likely_pathogenic | 0.7805 | pathogenic | -0.407 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.512666176 | None | None | N |
P/S | 0.5531 | ambiguous | 0.4914 | ambiguous | -1.226 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.505157758 | None | None | N |
P/T | 0.5909 | likely_pathogenic | 0.5495 | ambiguous | -1.188 | Destabilizing | 1.0 | D | 0.767 | deleterious | D | 0.547153166 | None | None | N |
P/V | 0.6575 | likely_pathogenic | 0.6322 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
P/W | 0.9483 | likely_pathogenic | 0.9331 | pathogenic | -1.286 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
P/Y | 0.8445 | likely_pathogenic | 0.7993 | pathogenic | -1.03 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.