Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27259 | 82000;82001;82002 | chr2:178564357;178564356;178564355 | chr2:179429084;179429083;179429082 |
N2AB | 25618 | 77077;77078;77079 | chr2:178564357;178564356;178564355 | chr2:179429084;179429083;179429082 |
N2A | 24691 | 74296;74297;74298 | chr2:178564357;178564356;178564355 | chr2:179429084;179429083;179429082 |
N2B | 18194 | 54805;54806;54807 | chr2:178564357;178564356;178564355 | chr2:179429084;179429083;179429082 |
Novex-1 | 18319 | 55180;55181;55182 | chr2:178564357;178564356;178564355 | chr2:179429084;179429083;179429082 |
Novex-2 | 18386 | 55381;55382;55383 | chr2:178564357;178564356;178564355 | chr2:179429084;179429083;179429082 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 0.006 | N | 0.425 | 0.155 | 0.293502639404 | gnomAD-4.0.0 | 6.84241E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99473E-07 | 0 | 0 |
D/G | rs1704865005 | None | 0.011 | N | 0.42 | 0.182 | 0.183819452728 | gnomAD-4.0.0 | 6.84241E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
D/V | None | None | 0.026 | N | 0.568 | 0.157 | 0.461759001683 | gnomAD-4.0.0 | 6.84241E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.5227E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1056 | likely_benign | 0.0954 | benign | -0.452 | Destabilizing | 0.006 | N | 0.425 | neutral | N | 0.475647957 | None | None | N |
D/C | 0.5067 | ambiguous | 0.4673 | ambiguous | 0.109 | Stabilizing | 0.747 | D | 0.519 | neutral | None | None | None | None | N |
D/E | 0.0563 | likely_benign | 0.0524 | benign | -0.307 | Destabilizing | None | N | 0.119 | neutral | N | 0.370192574 | None | None | N |
D/F | 0.4137 | ambiguous | 0.3653 | ambiguous | -0.481 | Destabilizing | 0.439 | N | 0.526 | neutral | None | None | None | None | N |
D/G | 0.1669 | likely_benign | 0.1372 | benign | -0.62 | Destabilizing | 0.011 | N | 0.42 | neutral | N | 0.509531245 | None | None | N |
D/H | 0.2676 | likely_benign | 0.2318 | benign | -0.363 | Destabilizing | 0.162 | N | 0.463 | neutral | N | 0.472681777 | None | None | N |
D/I | 0.1792 | likely_benign | 0.1569 | benign | -0.058 | Destabilizing | 0.204 | N | 0.615 | neutral | None | None | None | None | N |
D/K | 0.1872 | likely_benign | 0.1482 | benign | 0.387 | Stabilizing | 0.007 | N | 0.395 | neutral | None | None | None | None | N |
D/L | 0.199 | likely_benign | 0.1753 | benign | -0.058 | Destabilizing | 0.035 | N | 0.596 | neutral | None | None | None | None | N |
D/M | 0.3512 | ambiguous | 0.3097 | benign | 0.22 | Stabilizing | 0.439 | N | 0.503 | neutral | None | None | None | None | N |
D/N | 0.1229 | likely_benign | 0.1075 | benign | 0.097 | Stabilizing | 0.026 | N | 0.386 | neutral | N | 0.473090442 | None | None | N |
D/P | 0.3502 | ambiguous | 0.3119 | benign | -0.169 | Destabilizing | None | N | 0.295 | neutral | None | None | None | None | N |
D/Q | 0.1761 | likely_benign | 0.1449 | benign | 0.1 | Stabilizing | 0.007 | N | 0.349 | neutral | None | None | None | None | N |
D/R | 0.285 | likely_benign | 0.2335 | benign | 0.452 | Stabilizing | 0.018 | N | 0.61 | neutral | None | None | None | None | N |
D/S | 0.1221 | likely_benign | 0.1096 | benign | 0.003 | Stabilizing | 0.007 | N | 0.382 | neutral | None | None | None | None | N |
D/T | 0.1684 | likely_benign | 0.1488 | benign | 0.138 | Stabilizing | 0.015 | N | 0.427 | neutral | None | None | None | None | N |
D/V | 0.1094 | likely_benign | 0.0984 | benign | -0.169 | Destabilizing | 0.026 | N | 0.568 | neutral | N | 0.498140815 | None | None | N |
D/W | 0.8044 | likely_pathogenic | 0.7588 | pathogenic | -0.338 | Destabilizing | 0.747 | D | 0.553 | neutral | None | None | None | None | N |
D/Y | 0.1993 | likely_benign | 0.1816 | benign | -0.241 | Destabilizing | 0.371 | N | 0.542 | neutral | N | 0.505837578 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.