Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27265 | 82018;82019;82020 | chr2:178564339;178564338;178564337 | chr2:179429066;179429065;179429064 |
N2AB | 25624 | 77095;77096;77097 | chr2:178564339;178564338;178564337 | chr2:179429066;179429065;179429064 |
N2A | 24697 | 74314;74315;74316 | chr2:178564339;178564338;178564337 | chr2:179429066;179429065;179429064 |
N2B | 18200 | 54823;54824;54825 | chr2:178564339;178564338;178564337 | chr2:179429066;179429065;179429064 |
Novex-1 | 18325 | 55198;55199;55200 | chr2:178564339;178564338;178564337 | chr2:179429066;179429065;179429064 |
Novex-2 | 18392 | 55399;55400;55401 | chr2:178564339;178564338;178564337 | chr2:179429066;179429065;179429064 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs371129005 | 0.215 | 0.125 | N | 0.37 | 0.234 | None | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | N | None | 3.30715E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.83E-06 | 0 |
T/I | rs371129005 | 0.215 | 0.125 | N | 0.37 | 0.234 | None | gnomAD-3.1.2 | 1.05195E-04 | None | None | None | None | N | None | 3.86156E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs371129005 | 0.215 | 0.125 | N | 0.37 | 0.234 | None | gnomAD-4.0.0 | 1.54936E-05 | None | None | None | None | N | None | 3.07076E-04 | 0 | None | 0 | 2.23075E-05 | None | 0 | 0 | 8.47637E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.188 | likely_benign | 0.1729 | benign | -0.941 | Destabilizing | 0.952 | D | 0.512 | neutral | N | 0.487512754 | None | None | N |
T/C | 0.6562 | likely_pathogenic | 0.6426 | pathogenic | -0.652 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
T/D | 0.8432 | likely_pathogenic | 0.7754 | pathogenic | -0.567 | Destabilizing | 0.998 | D | 0.736 | deleterious | None | None | None | None | N |
T/E | 0.6897 | likely_pathogenic | 0.5884 | pathogenic | -0.516 | Destabilizing | 0.998 | D | 0.725 | deleterious | None | None | None | None | N |
T/F | 0.4634 | ambiguous | 0.3877 | ambiguous | -0.761 | Destabilizing | 0.989 | D | 0.802 | deleterious | None | None | None | None | N |
T/G | 0.7271 | likely_pathogenic | 0.6855 | pathogenic | -1.259 | Destabilizing | 0.998 | D | 0.555 | neutral | None | None | None | None | N |
T/H | 0.6137 | likely_pathogenic | 0.5349 | ambiguous | -1.468 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
T/I | 0.1999 | likely_benign | 0.1598 | benign | -0.164 | Destabilizing | 0.125 | N | 0.37 | neutral | N | 0.488649832 | None | None | N |
T/K | 0.5232 | ambiguous | 0.41 | ambiguous | -0.89 | Destabilizing | 0.995 | D | 0.735 | deleterious | None | None | None | None | N |
T/L | 0.1429 | likely_benign | 0.1288 | benign | -0.164 | Destabilizing | 0.929 | D | 0.551 | neutral | None | None | None | None | N |
T/M | 0.12 | likely_benign | 0.1098 | benign | 0.042 | Stabilizing | 0.997 | D | 0.778 | deleterious | None | None | None | None | N |
T/N | 0.457 | ambiguous | 0.3903 | ambiguous | -0.965 | Destabilizing | 0.998 | D | 0.728 | deleterious | N | 0.515024758 | None | None | N |
T/P | 0.4018 | ambiguous | 0.3606 | ambiguous | -0.389 | Destabilizing | 0.998 | D | 0.768 | deleterious | N | 0.488019733 | None | None | N |
T/Q | 0.5233 | ambiguous | 0.4543 | ambiguous | -1.044 | Destabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | N |
T/R | 0.475 | ambiguous | 0.3667 | ambiguous | -0.719 | Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
T/S | 0.3255 | likely_benign | 0.2938 | benign | -1.243 | Destabilizing | 0.976 | D | 0.521 | neutral | N | 0.514517779 | None | None | N |
T/V | 0.1519 | likely_benign | 0.1309 | benign | -0.389 | Destabilizing | 0.843 | D | 0.525 | neutral | None | None | None | None | N |
T/W | 0.8191 | likely_pathogenic | 0.7605 | pathogenic | -0.718 | Destabilizing | 1.0 | D | 0.739 | deleterious | None | None | None | None | N |
T/Y | 0.5814 | likely_pathogenic | 0.4978 | ambiguous | -0.487 | Destabilizing | 0.998 | D | 0.82 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.