Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2727 | 8404;8405;8406 | chr2:178770613;178770612;178770611 | chr2:179635340;179635339;179635338 |
N2AB | 2727 | 8404;8405;8406 | chr2:178770613;178770612;178770611 | chr2:179635340;179635339;179635338 |
N2A | 2727 | 8404;8405;8406 | chr2:178770613;178770612;178770611 | chr2:179635340;179635339;179635338 |
N2B | 2681 | 8266;8267;8268 | chr2:178770613;178770612;178770611 | chr2:179635340;179635339;179635338 |
Novex-1 | 2681 | 8266;8267;8268 | chr2:178770613;178770612;178770611 | chr2:179635340;179635339;179635338 |
Novex-2 | 2681 | 8266;8267;8268 | chr2:178770613;178770612;178770611 | chr2:179635340;179635339;179635338 |
Novex-3 | 2727 | 8404;8405;8406 | chr2:178770613;178770612;178770611 | chr2:179635340;179635339;179635338 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | D | 0.197 | 0.088 | 0.220303561663 | gnomAD-4.0.0 | 1.36817E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79859E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0854 | likely_benign | 0.0805 | benign | -0.957 | Destabilizing | None | N | 0.197 | neutral | D | 0.56079042 | None | None | N |
T/C | 0.3823 | ambiguous | 0.379 | ambiguous | -0.487 | Destabilizing | 0.824 | D | 0.545 | neutral | None | None | None | None | N |
T/D | 0.2985 | likely_benign | 0.2909 | benign | -0.067 | Destabilizing | 0.081 | N | 0.49 | neutral | None | None | None | None | N |
T/E | 0.2307 | likely_benign | 0.2392 | benign | 0.063 | Stabilizing | 0.081 | N | 0.461 | neutral | None | None | None | None | N |
T/F | 0.2351 | likely_benign | 0.2352 | benign | -0.797 | Destabilizing | 0.555 | D | 0.597 | neutral | None | None | None | None | N |
T/G | 0.2598 | likely_benign | 0.2328 | benign | -1.323 | Destabilizing | 0.035 | N | 0.526 | neutral | None | None | None | None | N |
T/H | 0.2398 | likely_benign | 0.2353 | benign | -1.359 | Destabilizing | 0.824 | D | 0.582 | neutral | None | None | None | None | N |
T/I | 0.1618 | likely_benign | 0.165 | benign | -0.029 | Destabilizing | 0.317 | N | 0.537 | neutral | N | 0.510104585 | None | None | N |
T/K | 0.2502 | likely_benign | 0.2546 | benign | -0.194 | Destabilizing | 0.081 | N | 0.461 | neutral | None | None | None | None | N |
T/L | 0.1069 | likely_benign | 0.1093 | benign | -0.029 | Destabilizing | 0.081 | N | 0.492 | neutral | None | None | None | None | N |
T/M | 0.0971 | likely_benign | 0.0925 | benign | -0.031 | Destabilizing | 0.791 | D | 0.549 | neutral | None | None | None | None | N |
T/N | 0.1129 | likely_benign | 0.1096 | benign | -0.557 | Destabilizing | 0.062 | N | 0.474 | neutral | N | 0.503744805 | None | None | N |
T/P | 0.3489 | ambiguous | 0.3635 | ambiguous | -0.305 | Destabilizing | 0.317 | N | 0.542 | neutral | D | 0.564047755 | None | None | N |
T/Q | 0.2227 | likely_benign | 0.2095 | benign | -0.45 | Destabilizing | 0.38 | N | 0.555 | neutral | None | None | None | None | N |
T/R | 0.2001 | likely_benign | 0.1993 | benign | -0.283 | Destabilizing | 0.38 | N | 0.543 | neutral | None | None | None | None | N |
T/S | 0.0892 | likely_benign | 0.084 | benign | -0.96 | Destabilizing | None | N | 0.222 | neutral | N | 0.439804904 | None | None | N |
T/V | 0.1347 | likely_benign | 0.1377 | benign | -0.305 | Destabilizing | 0.081 | N | 0.487 | neutral | None | None | None | None | N |
T/W | 0.5956 | likely_pathogenic | 0.5608 | ambiguous | -0.78 | Destabilizing | 0.935 | D | 0.618 | neutral | None | None | None | None | N |
T/Y | 0.2859 | likely_benign | 0.2734 | benign | -0.452 | Destabilizing | 0.555 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.