Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27291 | 82096;82097;82098 | chr2:178564261;178564260;178564259 | chr2:179428988;179428987;179428986 |
N2AB | 25650 | 77173;77174;77175 | chr2:178564261;178564260;178564259 | chr2:179428988;179428987;179428986 |
N2A | 24723 | 74392;74393;74394 | chr2:178564261;178564260;178564259 | chr2:179428988;179428987;179428986 |
N2B | 18226 | 54901;54902;54903 | chr2:178564261;178564260;178564259 | chr2:179428988;179428987;179428986 |
Novex-1 | 18351 | 55276;55277;55278 | chr2:178564261;178564260;178564259 | chr2:179428988;179428987;179428986 |
Novex-2 | 18418 | 55477;55478;55479 | chr2:178564261;178564260;178564259 | chr2:179428988;179428987;179428986 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1197029579 | None | 0.822 | N | 0.464 | 0.305 | 0.294206760003 | gnomAD-4.0.0 | 1.59247E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77316E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | None | None | 0.822 | N | 0.398 | 0.272 | 0.188950314367 | gnomAD-4.0.0 | 2.05333E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79893E-06 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2558 | likely_benign | 0.2604 | benign | -0.63 | Destabilizing | 0.822 | D | 0.399 | neutral | N | 0.474725103 | None | None | I |
E/C | 0.8798 | likely_pathogenic | 0.9019 | pathogenic | -0.111 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | I |
E/D | 0.1101 | likely_benign | 0.109 | benign | -0.629 | Destabilizing | 0.006 | N | 0.167 | neutral | N | 0.45141873 | None | None | I |
E/F | 0.8767 | likely_pathogenic | 0.8947 | pathogenic | -0.473 | Destabilizing | 0.993 | D | 0.642 | neutral | None | None | None | None | I |
E/G | 0.2217 | likely_benign | 0.2292 | benign | -0.891 | Destabilizing | 0.822 | D | 0.464 | neutral | N | 0.508024161 | None | None | I |
E/H | 0.5652 | likely_pathogenic | 0.6188 | pathogenic | -0.57 | Destabilizing | 0.993 | D | 0.365 | neutral | None | None | None | None | I |
E/I | 0.6457 | likely_pathogenic | 0.6765 | pathogenic | 0.046 | Stabilizing | 0.978 | D | 0.641 | neutral | None | None | None | None | I |
E/K | 0.1871 | likely_benign | 0.2162 | benign | -0.088 | Destabilizing | 0.822 | D | 0.394 | neutral | N | 0.456999242 | None | None | I |
E/L | 0.648 | likely_pathogenic | 0.6821 | pathogenic | 0.046 | Stabilizing | 0.978 | D | 0.617 | neutral | None | None | None | None | I |
E/M | 0.5736 | likely_pathogenic | 0.6042 | pathogenic | 0.392 | Stabilizing | 0.998 | D | 0.582 | neutral | None | None | None | None | I |
E/N | 0.2329 | likely_benign | 0.2386 | benign | -0.406 | Destabilizing | 0.754 | D | 0.365 | neutral | None | None | None | None | I |
E/P | 0.9754 | likely_pathogenic | 0.977 | pathogenic | -0.158 | Destabilizing | 0.978 | D | 0.44 | neutral | None | None | None | None | I |
E/Q | 0.1666 | likely_benign | 0.1839 | benign | -0.338 | Destabilizing | 0.822 | D | 0.398 | neutral | N | 0.515488851 | None | None | I |
E/R | 0.3507 | ambiguous | 0.4022 | ambiguous | 0.085 | Stabilizing | 0.978 | D | 0.373 | neutral | None | None | None | None | I |
E/S | 0.2242 | likely_benign | 0.2208 | benign | -0.613 | Destabilizing | 0.754 | D | 0.362 | neutral | None | None | None | None | I |
E/T | 0.3086 | likely_benign | 0.3377 | benign | -0.404 | Destabilizing | 0.86 | D | 0.403 | neutral | None | None | None | None | I |
E/V | 0.4064 | ambiguous | 0.435 | ambiguous | -0.158 | Destabilizing | 0.971 | D | 0.483 | neutral | N | 0.495742647 | None | None | I |
E/W | 0.9586 | likely_pathogenic | 0.9668 | pathogenic | -0.31 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | I |
E/Y | 0.7541 | likely_pathogenic | 0.786 | pathogenic | -0.243 | Destabilizing | 0.993 | D | 0.589 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.